RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SFTA3P0C7M3 94 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 CDCP2Q5VXM1 449 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
CLIP1-203ENST00000361654 PDE6DO43924 150 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 HBZP02008 142 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 PPOXP50336 477 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 DMKNQ6E0U4 476 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-203ENST00000361654 LRRC3BQ96PB8 259 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 CHRNA10Q9GZZ6 450 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 SCN7AQ01118 1682 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 TRAV39A0A0B4J263 110 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 NTN1O95631 604 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 COX5BP10606 129 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 NAT2P11245 290 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 NPPCP23582 126 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 SSX1Q16384 188 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 HIST3H3Q16695 136 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 RIPPLY2Q5TAB7 128 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 SEZ6L2Q6UXD5 910 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 SLC35E3Q7Z769 313 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 FDCSPQ8NFU4 85 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 ANAPC16Q96DE5 110 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 ABHD17AQ96GS6 310 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 PKIBQ9C010 78 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 ASXL3Q9C0F0 2248 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 CIDEAO60543 219 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 HPXP02790 462 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 THY1P04216 161 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 PGA4P0DJD7 388 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 PGA5P0DJD9 388 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 COX6A1P12074 109 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 FGF12P61328 243 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 GVQW1Q8N7I0 195 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 TOLLIPQ9H0E2 274 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 NPVFQ9HCQ7 196 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 DOCK1Q14185 1865 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 J3QW42 95 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF324O75467 553 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-203ENST00000361654 RD3LP0DJH9 198 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 CLLU1Q5K131 121 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 TIMM23BQ5SRD1 257 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
CLIP1-203ENST00000361654 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
CLIP1-203ENST00000361654 A0A1W2PNV4 684 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ZNF729A6NN14 1252 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 WNT5AP41221 380 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PSG9Q00887 426 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PCOLCEQ15113 449 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ATP1A1-AS1Q5TC04 95 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TOMM20LQ6UXN7 152 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 MSRB3Q8IXL7 192 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 OR1N2Q8NGR9 330 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 MAP1LC3CQ9BXW4 147 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 IGKV3D-15A0A087WSY6 115 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TMSB15BA0A087X1C1 80 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 NPIPB11E5RHQ5 1161 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 IGKV3-15P01624 115 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PEBP1P30086 187 aaKnown RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FGF8P55075 233 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 SLC16A13Q7RTY0 426 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 GALNT14Q96FL9 552 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 GPX7Q96SL4 187 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PARD6AQ9NPB6 346 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 CALYQ9NYX4 217 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FRRS1LQ9P0K9 344 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TAF1P21675 1872 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 M0R2Z0 102 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 SPRED2Q7Z698 418 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 C1orf162Q8NEQ5 155 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PTX4Q96A99 478 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 VPS25Q9BRG1 176 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 KIAA1551Q9HCM1 1747 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ODAMA1E959 279 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TSPAN2O60636 221 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 SRSF10O75494 262 aaKnown RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 CYB5R3P00387 301 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 ZP3P21754 424 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 NRN1LQ496H8 165 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 PNKDQ8N490 385 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM57AQ8TBR7 257 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FOXJ2Q9P0K8 574 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 TRPM3Q9HCF6 1732 aaPredicted RBP9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A10PA6NDY2 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A18PA6NE21 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A16PA6NEW6 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A20PA6NIJ5 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A8PA6NJQ4 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A7PA6NKC0 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 OR4C45A6NMZ5 311 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A22PA8MWA6 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A12PA8MX19 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A5PA8MXJ8 464 aa9.48□□□□□ -0.89
CLIP1-203ENST00000361654 FAM90A23PA8MXZ1 464 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms