RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 M0QZK8 103 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 HSD17B6O14756 317 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 RGS11O94810 467 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 MT-ND4P03905 459 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 LPLP06858 475 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 SNRNP70P08621 437 aaKnown RBP6.11□□□□□ -1.43
SGMS1-201ENST00000361543 CD3GP09693 182 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 FAM106CPP0CH98 169 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 IL3RAP26951 378 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 SOX6P35712 828 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 TALDO1P37837 337 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 SERPINB10P48595 397 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 VEGFCP49767 419 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 RAB7AP51149 207 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 RORCP51449 518 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 TMBIM6P55061 237 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 CLDN12P56749 244 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 OR10A3P58181 314 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 PITPNAQ00169 270 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 MXD1Q05195 221 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 DIAPH2-AS1Q14236 149 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 NSUN5P1Q3KNT7 163 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 PDLIM3Q53GG5 364 aaPredicted RBP6.11□□□□□ -1.43
SGMS1-201ENST00000361543 IDNKQ5T6J7 187 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 STEAP3Q658P3 488 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 OR10K2Q6IF99 312 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 OR8H3Q8N146 312 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 DRAM1Q8N682 238 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 C8orf31Q8N9H6 132 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 OR10R2Q8NGX6 335 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 ARL11Q969Q4 196 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 SLC25A46Q96AG3 418 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 CMTM3Q96MX0 182 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 CITED2Q99967 270 aaPredicted RBP6.11□□□□□ -1.43
SGMS1-201ENST00000361543 DIABLOQ9NR28 239 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 GFOD1Q9NXC2 390 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 MOB4Q9Y3A3 225 aa6.11□□□□□ -1.43
SGMS1-201ENST00000361543 TRBV6-6A0A0A6YYG2 114 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 IGHV3-43A0A0B4J1X8 118 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 UBE2QL1A1L167 161 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 SH2D7A6NKC9 451 aaPredicted RBP6.1□□□□□ -1.43
SGMS1-201ENST00000361543 FAM90A9PA6NNJ1 464 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 DIRAS3O95661 229 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 IGKV1D-33P01593 117 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 IGKV1-33P01594 117 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 OPN1MWP04001 364 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 AMY1AP04745 511 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 AMY2AP04746 511 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 GSTP1P09211 210 aaKnown RBP6.1□□□□□ -1.43
SGMS1-201ENST00000361543 OPN1MW2P0DN77 364 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 OPN1MW3P0DN78 364 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 IGHV3-43DP0DP04 118 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 TMEM11P17152 192 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 REG1BP48304 166 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 LOXL3P58215 753 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 ZNF816Q0VGE8 651 aaPredicted RBP6.1□□□□□ -1.43
SGMS1-201ENST00000361543 HES1Q14469 280 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 KIR2DS1Q14954 304 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 C9orf152Q5JTZ5 239 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 GPR107Q5VW38 600 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 SIGIRRQ6IA17 410 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 MZT2AQ6P582 158 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 NDUFA11Q86Y39 141 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 THNSL2Q86YJ6 484 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 PRR18Q8N4B5 295 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 LINC00311Q8N616 119 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 OR5AU1Q8NGC0 362 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 OR4K15Q8NH41 348 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 LGALS14Q8TCE9 139 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 GALMQ96C23 342 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 S100A16Q96FQ6 103 aaKnown RBP6.1□□□□□ -1.43
SGMS1-201ENST00000361543 ATG5Q9H1Y0 275 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 GHITMQ9H3K2 345 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
SGMS1-201ENST00000361543 RHBDL2Q9NX52 303 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 GNG12Q9UBI6 72 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 SPATA2Q9UM82 520 aa6.1□□□□□ -1.43
SGMS1-201ENST00000361543 NOTCH3Q9UM47 2321 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 IGHV1-3A0A0C4DH29 117 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 SMIM31A0A1B0GVY4 71 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 ADARB2-AS1A8MUL3 147 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 TXNL1O43396 289 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 NAPSAO96009 420 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 HBZP02008 142 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 GAPDHP04406 335 aaKnown RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 HIST1H1DP16402 221 aaKnown RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 RCC1P18754 421 aaPredicted RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 DTYMKP23919 212 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 LSM3P62310 102 aaKnown RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 HTD2P86397 168 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 HNF4GQ14541 408 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 SRSF7Q16629 238 aaKnown RBP eCLIP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 PNLIPRP3Q17RR3 467 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 UBE2NLQ5JXB2 153 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 LY6G6FQ5SQ64 297 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 FAM53AQ6NSI3 398 aaPredicted RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 SLC25A48Q6ZT89 311 aaKnown RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 C6orf201Q7Z4U5 140 aa6.09□□□□□ -1.43
SGMS1-201ENST00000361543 CENPVQ7Z7K6 275 aaPredicted RBP6.09□□□□□ -1.43
SGMS1-201ENST00000361543 MOB3BQ86TA1 216 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms