RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NME2P1O60361 137 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SP1P08047 785 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 SP9P0CG40 484 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 IGKV1-13P0DP09 117 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CD80P33681 288 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 WNT5AP41221 380 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 COMMD1Q8N668 190 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 LILRB1Q8NHL6 650 aaPredicted RBP6.17□□□□□ -1.42
CLCN3-202ENST00000360642 CACFD1Q9UGQ2 172 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 R4GN57 208 aa6.17□□□□□ -1.42
CLCN3-202ENST00000360642 KIR2DS1A0A191URI9 304 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 AGPAT2O15120 278 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 IL32P24001 234 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 KIR2DS4P43632 304 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 KIR2DS1Q14954 304 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 TSC22D1Q15714 1073 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 IGFBP7Q16270 282 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PCSK4Q6UW60 755 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 MEX3BQ6ZN04 569 aaKnown RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 GAPTQ8N292 157 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 MRPL30Q8TCC3 161 aaKnown RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 Q96MF0 132 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 DUXBA0A1W2PPF3 345 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 H7C2Y5 167 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 CTXN2P0C2S0 81 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 NFYBP25208 207 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 UCP1P25874 307 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 EIF2S3P41091 472 aaKnown RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 RAB5CP51148 216 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 EWSR1Q01844 656 aaKnown RBP eCLIP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PLGLB1Q02325 96 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 GNMTQ14749 295 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 C3AR1Q16581 482 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 SUMF2Q8NBJ7 301 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 ABHD14BQ96IU4 210 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 SH3BGRL3Q9H299 93 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 RIMS4Q9H426 269 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 KLF13Q9Y2Y9 288 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PRELID3BQ9Y3B1 194 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 MPC1Q9Y5U8 109 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 KLF2Q9Y5W3 355 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 TRAV24A0A0B4J272 114 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 OR5B21A6NL26 309 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 MT-CO3P00414 261 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 TNFRSF1AP19438 455 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PVALBP20472 110 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 FHITP49789 147 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PLP2Q04941 152 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 IL24Q13007 206 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 MIDNQ504T8 468 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 FAM76BQ5HYJ3 339 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF695Q8IW36 515 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 ODF3L1Q8IXM7 274 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 ZFP62Q8NB50 900 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 OR1K1Q8NGR3 316 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 OR10Z1Q8NGY1 313 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PLPPR1Q8TBJ4 325 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 SECTM1Q8WVN6 248 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 BCL2L2Q92843 193 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 IP6K3Q96PC2 410 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 PARP12Q9H0J9 701 aaKnown RBP6.16□□□□□ -1.42
CLCN3-202ENST00000360642 SPACA1Q9HBV2 294 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 LIPGQ9Y5X9 500 aa6.16□□□□□ -1.42
CLCN3-202ENST00000360642 A8MZ25 164 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 KLRC4-KLRK1H3BQV0 150 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 PRKACAP17612 351 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 NKX2-1P43699 371 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-202ENST00000360642 HIKESHIQ53FT3 197 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 DTX2Q86UW9 622 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF573Q86YE8 665 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF565Q8N9K5 539 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 IL22RA2Q969J5 263 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 PKIBQ9C010 78 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 OR51I2Q9H344 312 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 CCL28Q9NRJ3 127 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 LYRM2Q9NU23 88 aaPredicted RBP6.15□□□□□ -1.42
CLCN3-202ENST00000360642 KIAA1456Q9P272 454 aa6.15□□□□□ -1.42
CLCN3-202ENST00000360642 STRAPQ9Y3F4 350 aaKnown RBP6.15□□□□□ -1.42
CLCN3-202ENST00000360642 LSM4Q9Y4Z0 139 aaKnown RBP6.15□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF407Q9C0G0 2248 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 MEX3AA1L020 520 aaKnown RBP6.15□□□□□ -1.43
CLCN3-202ENST00000360642 IGSF23A1L1A6 192 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 FAM24AA6NFZ4 105 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 ANKRD30BLA7E2S9 258 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 PROB1E7EW31 1015 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 HSPB6O14558 160 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 TSPAN15O95858 294 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 WNT2P09544 360 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 VDAC1P21796 283 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 PAX6P26367 422 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 POLR2GP62487 172 aaKnown RBP eCLIP6.15□□□□□ -1.43
CLCN3-202ENST00000360642 GNG3P63215 75 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 SLC10A1Q14973 349 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 HMGN3Q15651 99 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 SPIN3Q5JUX0 258 aa6.15□□□□□ -1.43
CLCN3-202ENST00000360642 ZNF324BQ6AW86 544 aaPredicted RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms