RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ZNF90Q03938 601 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 BTNL3Q6UXE8 466 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SPNS3Q6ZMD2 512 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 WDFY1Q8IWB7 410 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 Q8IYB0 196 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 C11orf42Q8N5U0 333 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 GTF3AQ92664 365 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 TP53RKQ96S44 253 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 AURKAIP1Q9NWT8 199 aaPredicted RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 PROCRQ9UNN8 238 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 OR2W1Q9Y3N9 320 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 M0R1B8 84 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 AGFG2O95081 481 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 CRYAAP02489 173 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 ATP1A1-AS1Q5TC04 95 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SIGLEC12Q96PQ1 595 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 TM2D1Q9BX74 207 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SPTAN1Q13813 2472 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 IGLV3-32A0A0A0MS00 114 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 J3QT63 122 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 SP1P08047 785 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 PGA5P0DJD9 388 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 PMCHP20382 165 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
COL20A1-201ENST00000358894 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM222Q9H0R3 208 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 FKBP11Q9NYL4 201 aa10.55□□□□□ -0.72
COL20A1-201ENST00000358894 CADP27708 2225 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 KITLGP21583 273 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 PPP1CCP36873 323 aaKnown RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 PMELP40967 661 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SLC38A11Q08AI6 406 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 TMEM187Q14656 261 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SMIM21Q3B7S5 101 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 FBXW9Q5XUX1 488 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 ZADH2Q8N4Q0 377 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SIGLECL1Q8N7X8 197 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SLC25A40Q8TBP6 338 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 hCG_38984A0A1B0GV85 526 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 DOCK10Q96BY6 2186 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF552Q9H707 407 aaPredicted RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SLC25A22Q9H936 323 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 IL36RNQ9UBH0 155 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 SRSF10O75494 262 aaKnown RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 MT-CO2P00403 227 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 HIST1H3AP68431 136 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 MYPOPQ86VE0 399 aaPredicted RBP10.54□□□□□ -0.72
COL20A1-201ENST00000358894 CYB561D1Q8N8Q1 229 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 DEFB124Q8NES8 71 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 FGFBP3Q8TAT2 258 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 MISP3Q96FF7 219 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 PCNX3Q9H6A9 2034 aa10.54□□□□□ -0.72
COL20A1-201ENST00000358894 TGIF2-C20orf24A0A0A6YYL0 155 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 C21orf140B9A014 251 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 SPRY3O43610 288 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 HLA-GP17693 338 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 F2RP25116 425 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF83P51522 516 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 IL24Q13007 206 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ZIC4Q8N9L1 334 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 LOC102723996A0A087X1L8 192 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 CCL1P22362 96 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 SUPT4H1P63272 117 aaKnown RBP10.53□□□□□ -0.72
COL20A1-201ENST00000358894 NUFIP2Q7Z417 695 aaKnown RBP10.53□□□□□ -0.72
COL20A1-201ENST00000358894 E9PLN8 166 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 M0R1X1 148 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 HOXA5P20719 270 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 GALR1P47211 349 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF818PQ6ZRF7 136 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 FAM89BQ8N5H3 189 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 ATP5SQ99766 215 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 PNRC2Q9NPJ4 139 aaKnown RBP10.53□□□□□ -0.72
COL20A1-201ENST00000358894 DEPPQ9NTK1 212 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 FOXJ2Q9P0K8 574 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
COL20A1-201ENST00000358894 FCGR3BO75015 233 aa10.52□□□□□ -0.72
COL20A1-201ENST00000358894 COX5AP20674 150 aa10.52□□□□□ -0.72
COL20A1-201ENST00000358894 WDR25Q64LD2 544 aaPredicted RBP10.52□□□□□ -0.72
COL20A1-201ENST00000358894 ZNF581Q9P0T4 197 aa10.52□□□□□ -0.72
COL20A1-201ENST00000358894 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 CA11O75493 328 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 QRFPP83859 136 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 CPEB3Q8NE35 698 aaKnown RBP10.52□□□□□ -0.73
COL20A1-201ENST00000358894 H1FXQ92522 213 aaKnown RBP10.52□□□□□ -0.73
COL20A1-201ENST00000358894 RSG1Q9BU20 258 aa10.52□□□□□ -0.73
COL20A1-201ENST00000358894 ATP23Q9Y6H3 246 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms