RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 RAMP3O60896 148 aa7□□□□□ -1.29
CD46-205ENST00000358170 CD59P13987 128 aa7□□□□□ -1.29
CD46-205ENST00000358170 MMP9P14780 707 aa7□□□□□ -1.29
CD46-205ENST00000358170 MPV17P39210 176 aa7□□□□□ -1.29
CD46-205ENST00000358170 RAB2AP61019 212 aa7□□□□□ -1.29
CD46-205ENST00000358170 RNPS1Q15287 305 aaKnown RBP7□□□□□ -1.29
CD46-205ENST00000358170 HMGN3Q15651 99 aa7□□□□□ -1.29
CD46-205ENST00000358170 ZNF324BQ6AW86 544 aaPredicted RBP7□□□□□ -1.29
CD46-205ENST00000358170 SPSB3Q6PJ21 355 aa7□□□□□ -1.29
CD46-205ENST00000358170 ZNF561Q8N587 486 aa7□□□□□ -1.29
CD46-205ENST00000358170 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
CD46-205ENST00000358170 PCSK5Q92824 1860 aa7□□□□□ -1.29
CD46-205ENST00000358170 FER1L6-AS2Q96M78 137 aa7□□□□□ -1.29
CD46-205ENST00000358170 ZPBPQ9BS86 351 aa7□□□□□ -1.29
CD46-205ENST00000358170 LINC00470Q9BZP3 86 aa7□□□□□ -1.29
CD46-205ENST00000358170 RNF122Q9H9V4 155 aa7□□□□□ -1.29
CD46-205ENST00000358170 TREM2Q9NZC2 230 aa7□□□□□ -1.29
CD46-205ENST00000358170 KCNIP1Q9NZI2 227 aa7□□□□□ -1.29
CD46-205ENST00000358170 MPC1Q9Y5U8 109 aa7□□□□□ -1.29
CD46-205ENST00000358170 TGIF2-C20orf24A0A0A6YYL0 155 aa7□□□□□ -1.29
CD46-205ENST00000358170 CLEC18AA5D8T8 446 aa7□□□□□ -1.29
CD46-205ENST00000358170 H0Y980 276 aa7□□□□□ -1.29
CD46-205ENST00000358170 J3QT63 122 aa7□□□□□ -1.29
CD46-205ENST00000358170 TIMM8AO60220 97 aaPredicted RBP7□□□□□ -1.29
CD46-205ENST00000358170 PSPNO60542 156 aa7□□□□□ -1.29
CD46-205ENST00000358170 RPS23P62266 143 aaKnown RBP7□□□□□ -1.29
CD46-205ENST00000358170 TLE4Q04727 773 aa7□□□□□ -1.29
CD46-205ENST00000358170 PSG7Q13046 419 aa7□□□□□ -1.29
CD46-205ENST00000358170 MRPL49Q13405 166 aaKnown RBP7□□□□□ -1.29
CD46-205ENST00000358170 ZNF787Q6DD87 383 aa7□□□□□ -1.29
CD46-205ENST00000358170 ODF3L1Q8IXM7 274 aa7□□□□□ -1.29
CD46-205ENST00000358170 CLEC18CQ8NCF0 446 aa7□□□□□ -1.29
CD46-205ENST00000358170 TCTEX1D2Q8WW35 142 aa7□□□□□ -1.29
CD46-205ENST00000358170 NINJ1Q92982 152 aa7□□□□□ -1.29
CD46-205ENST00000358170 ATP5SQ99766 215 aa7□□□□□ -1.29
CD46-205ENST00000358170 NIPSNAP3BQ9BS92 247 aa7□□□□□ -1.29
CD46-205ENST00000358170 SCRT1Q9BWW7 348 aa7□□□□□ -1.29
CD46-205ENST00000358170 GPR87Q9BY21 358 aa7□□□□□ -1.29
CD46-205ENST00000358170 ARV1Q9H2C2 271 aa7□□□□□ -1.29
CD46-205ENST00000358170 OR51I2Q9H344 312 aa7□□□□□ -1.29
CD46-205ENST00000358170 TMPRSS5Q9H3S3 457 aa7□□□□□ -1.29
CD46-205ENST00000358170 SPAARA0A1B0GVQ0 90 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 OR5H1A6NKK0 313 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 OR5B21A6NL26 309 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 CDX4O14627 284 aaPredicted RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 SH2D1BO14796 132 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 CYB5BO43169 146 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 IGKV1-39P01597 117 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 IGKV1D-39P04432 117 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 HEXAP06865 529 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 SP9P0CG40 484 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 TGFBR3Q03167 851 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 FIP1L1Q6UN15 594 aaKnown RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 DRAM1Q8N682 238 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 BCL2L2Q92843 193 aaPredicted RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 GNPNAT1Q96EK6 184 aaPredicted RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 AURKAIP1Q9NWT8 199 aaPredicted RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 COA4Q9NYJ1 87 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 ADGRG4Q8IZF6 3080 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 SMCO3A2RU48 225 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 SCAF4O95104 1147 aaKnown RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 IGKV1-5P01602 117 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 SSTR5P35346 364 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 VWA1Q6PCB0 445 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 ZNF880Q6PDB4 577 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 H1FOOQ8IZA3 346 aaPredicted RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 FGFRL1Q8N441 504 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 LFNGQ8NES3 379 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 OR5D13Q8NGL4 314 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 RPUSD4Q96CM3 377 aaKnown RBP6.99□□□□□ -1.29
CD46-205ENST00000358170 SDSLQ96GA7 329 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 OR4C12Q96R67 309 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 SLC25A22Q9H936 323 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 TNCP24821 2201 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 RAC2P15153 192 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 IGHV1-2P23083 117 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 TAS2R30P59541 319 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 DDA1Q9BW61 102 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 METRNQ9UJH8 293 aa6.99□□□□□ -1.29
CD46-205ENST00000358170 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 ST8SIA5O15466 376 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 HAND1O96004 215 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 SRP19P09132 144 aaKnown RBP6.98□□□□□ -1.29
CD46-205ENST00000358170 GLIPR1P48060 266 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 UCP2P55851 309 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 ICAM4Q14773 271 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 COMMD1Q8N668 190 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 KLF14Q8TD94 323 aaPredicted RBP6.98□□□□□ -1.29
CD46-205ENST00000358170 ZDHHC16Q969W1 377 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 RIMS4Q9H426 269 aaPredicted RBP6.98□□□□□ -1.29
CD46-205ENST00000358170 PSG11Q9UQ72 335 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 MRPS18CQ9Y3D5 142 aaKnown RBP6.98□□□□□ -1.29
CD46-205ENST00000358170 AKAP6Q13023 2319 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 C21orf140B9A014 251 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 SMPD2O60906 423 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 IFNA17P01571 189 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 CXCL1P09341 107 aa6.98□□□□□ -1.29
CD46-205ENST00000358170 RPL30P62888 115 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms