RNA–Protein interactions for RNA: ENST00000357857.14

CLN3-204, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-204ENST00000357857 FASNP49327 2511 aaKnown RBP15.41■□□□□ 0.06
CLN3-204ENST00000357857 TRBV23-1A0A0A0MS06 115 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 GPR37O15354 613 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 RGS11O94810 467 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 WNT2P09544 360 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 TMEM30BQ3MIR4 351 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 MORN2Q502X0 79 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 TBC1D26Q86UD7 250 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 ZNF295-AS1Q8N0V1 137 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 EDARADDQ8WWZ3 215 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 AKR1E2Q96JD6 320 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 ZNF714Q96N38 554 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 GFOD1Q9NXC2 390 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 PRR13Q9NZ81 148 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 DCHS2Q6V1P9 2916 aa15.41■□□□□ 0.06
CLN3-204ENST00000357857 IGHV4-39P01824 125 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 OR5AC1P0C628 307 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 DBX1A6NMT0 343 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 SIX6O95475 246 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 IGLV2-14P01704 120 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 CCL3L1P16619 93 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 PRAMEF5Q5TYX0 476 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 ZNF525Q8N782 197 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 ZNF645Q8N7E2 425 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 OR10A7Q8NGE5 316 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 OR52M1Q8NGK5 317 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 FAM216AQ8WUB2 273 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 SUCNR1Q9BXA5 334 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 CHIAQ9BZP6 476 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 OR2D2Q9H210 308 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 PATZ1Q9HBE1 687 aaKnown RBP15.4■□□□□ 0.06
CLN3-204ENST00000357857 RNF150Q9ULK6 438 aa15.4■□□□□ 0.06
CLN3-204ENST00000357857 C3orf85A0A1B0GTC6 90 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 TNFSF12O43508 249 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 PGLYRP1O75594 196 aaPredicted RBP15.39■□□□□ 0.05
CLN3-204ENST00000357857 GIPP09681 153 aaPredicted RBP15.39■□□□□ 0.05
CLN3-204ENST00000357857 NFYBP25208 207 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 COL8A1P27658 744 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 TMEM187Q14656 261 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 SP6Q3SY56 376 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 WDR25Q64LD2 544 aaPredicted RBP15.39■□□□□ 0.05
CLN3-204ENST00000357857 DRAM1Q8N682 238 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 OR5M8Q8NGP6 311 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 GPHA2Q96T91 129 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 NARFLQ9H6Q4 476 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 PSG11Q9UQ72 335 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 MALRD1Q5VYJ5 2156 aa15.39■□□□□ 0.05
CLN3-204ENST00000357857 F5H0A9 414 aaPredicted RBP15.38■□□□□ 0.05
CLN3-204ENST00000357857 ST8SIA5O15466 376 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 PHF1O43189 567 aaPredicted RBP15.38■□□□□ 0.05
CLN3-204ENST00000357857 MMP23AO75900 390 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 OR2A4O95047 310 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 HLA-GP17693 338 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 EIF2B2P49770 351 aaKnown RBP15.38■□□□□ 0.05
CLN3-204ENST00000357857 PDLIM4P50479 330 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 H2BFSP57053 126 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 MSMO1Q15800 293 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 ZFP69Q49AA0 526 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 LY6G6FQ5SQ64 297 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 ZBTB34Q8NCN2 500 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 OR2A7Q96R45 310 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 TP53RKQ96S44 253 aa15.38■□□□□ 0.05
CLN3-204ENST00000357857 RPUSD1Q9UJJ7 312 aaKnown RBP15.38■□□□□ 0.05
CLN3-204ENST00000357857 CCSO14618 274 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 ITGB1BP1O14713 200 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 DCAF12L2Q5VW00 463 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 HEPN1Q6WQI6 88 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 RAB18Q9NP72 206 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 PIPOXQ9P0Z9 390 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 UTP20O75691 2785 aaKnown RBP15.37■□□□□ 0.05
CLN3-204ENST00000357857 SMLR1H3BR10 107 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 IGHV3-7P01780 117 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 DLX6P56179 175 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 RAP2BP61225 183 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 GNB2P62879 340 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 LIAT1Q6ZQX7 453 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 GLYATL2Q8WU03 294 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 ABHD14BQ96IU4 210 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 AGMATQ9BSE5 352 aa15.37■□□□□ 0.05
CLN3-204ENST00000357857 H0Y980 276 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 F2RP25116 425 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 RAB7AP51149 207 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 UTF1Q5T230 341 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 C8orf46Q8TAG6 207 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 ASB13Q8WXK3 278 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 LEAP2Q969E1 77 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 MSI2Q96DH6 328 aaKnown RBP15.36■□□□□ 0.05
CLN3-204ENST00000357857 ABHD14AQ9BUJ0 271 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 TMEM222Q9H0R3 208 aa15.36■□□□□ 0.05
CLN3-204ENST00000357857 BARX1Q9HBU1 254 aaPredicted RBP15.36■□□□□ 0.05
CLN3-204ENST00000357857 FAM25EA8MYX2 175 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 ADAP1O75689 374 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 C1QBP02746 253 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 GPR12P47775 334 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 ZNF134P52741 427 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 ATP5J2P56134 94 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 SRPXP78539 464 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 LGI3Q8N145 548 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 LRTM2Q8N967 370 aa15.35■□□□□ 0.05
CLN3-204ENST00000357857 OR51H1Q8NH63 302 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms