RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ISLRO14498 428 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 MC5RP33032 325 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 RPS4XP62701 263 aaKnown RBP10.2□□□□□ -0.78
COL9A1-202ENST00000357250 HIKESHIQ53FT3 197 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 FAM214BQ7L5A3 538 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 ADIPOR1Q96A54 375 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 CORTO00230 105 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 CRYBA1P05813 215 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 C11orf42Q8N5U0 333 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 AQP3Q92482 292 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 OR2V2Q96R30 315 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 SF3B6Q9Y3B4 125 aaKnown RBP10.2□□□□□ -0.78
COL9A1-202ENST00000357250 CDX4O14627 284 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-202ENST00000357250 OR2J3O76001 311 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 VSIG10L2P0DP72 767 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 BCL2P10415 239 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 COMPP49747 757 aaPredicted RBP10.2□□□□□ -0.78
COL9A1-202ENST00000357250 RPL30P62888 115 aaKnown RBP10.2□□□□□ -0.78
COL9A1-202ENST00000357250 LYPD8Q6UX82 237 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF596Q8TC21 504 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 VWCEQ96DN2 955 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 IL19Q9UHD0 177 aa10.2□□□□□ -0.78
COL9A1-202ENST00000357250 J3QR06 171 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 SMPD2O60906 423 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 MT-ND6P03923 174 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PSG2P11465 335 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF250P15622 560 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PRDX2P32119 198 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
COL9A1-202ENST00000357250 FAM181AQ8N9Y4 354 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 LOC390937A0A1W2PQ73 354 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 F2RL2O00254 374 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 DAOP14920 347 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 COL8A1P27658 744 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 FAM209AQ5JX71 171 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 C5orf17Q8NAS9 161 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 DNASE2BQ8WZ79 361 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 NRIP2Q9BQI9 281 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 DOK5Q9P104 306 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PPIAL4EA0A075B759 164 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PPIAL4DF5H284 164 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PAGE4O60829 102 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 FAM157CP0CG43 387 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PPIAL4FP0DN26 164 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 G0S2P27469 103 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 ERVS71-1P61550 626 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 SPINK9Q5DT21 86 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF343Q6P1L6 599 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM252Q8N6L7 170 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 OR4X1Q8NH49 305 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PPIAL4AQ9Y536 164 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PDCD11Q14690 1871 aaKnown RBP10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PRR33A8MZF0 331 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 HSPB1P04792 205 aaKnown RBP10.19□□□□□ -0.78
COL9A1-202ENST00000357250 ARG1P05089 322 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 LTBRP36941 435 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 OR2J1Q9GZK6 312 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 SLC2A8Q9NY64 477 aa10.19□□□□□ -0.78
COL9A1-202ENST00000357250 NDUFA2O43678 99 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 NMBP08949 121 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 CD1BP29016 333 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 CAMPP49913 170 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 STARD6P59095 220 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SPNS3Q6ZMD2 512 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SLC25A38Q96DW6 304 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 P2RX4Q99571 388 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 PRR13Q9NZ81 148 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 CLN8Q9UBY8 286 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 K7N7A8 449 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 G6PCP35575 357 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 UCP2P55851 309 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 ATP5IP56385 69 aaPredicted RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 Q1RN00 199 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM255AQ5JRV8 349 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 C1orf185Q5T7R7 199 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 AKAP6Q13023 2319 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 M0R2Z0 102 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 RD3LP0DJH9 198 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 UCP3P55916 312 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 HIST3H3Q16695 136 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 ZNF441Q8N8Z8 693 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 OR5AU1Q8NGC0 362 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SNX22Q96L94 193 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 ABHD14AQ9BUJ0 271 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SPTBN1Q01082 2364 aaKnown RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 DNASE2O00115 360 aaPredicted RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SEMA7AO75326 666 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 SRSF10O75494 262 aaKnown RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
COL9A1-202ENST00000357250 CALHM1Q8IU99 346 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 TMEM251Q8N6I4 163 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 WNT2BQ93097 391 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 GP6Q9HCN6 339 aa10.18□□□□□ -0.78
COL9A1-202ENST00000357250 CXCL2P19875 107 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms