RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 RAB3CQ96E17 227 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 YIPF6Q96EC8 236 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 CHCHD6Q9BRQ6 235 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 CENPOQ9BU64 300 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 ABHD14AQ9BUJ0 271 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.8□□□□□ -0.684e-8■■■■■ 28.9
SHANK2-202ENST00000357171 ABRACLQ9P1F3 81 aa10.8□□□□□ -0.68
SHANK2-202ENST00000357171 FGF16O43320 207 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 RGS11O94810 467 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 REG1BP48304 166 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 HLA-DRB3P79483 266 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 ZNF833PQ6ZTB9 187 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 C5orf56Q8N8D9 126 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 EAF1Q96JC9 268 aaPredicted RBP10.79□□□□□ -0.68
SHANK2-202ENST00000357171 CMSS1Q9BQ75 279 aaKnown RBP10.79□□□□□ -0.68
SHANK2-202ENST00000357171 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 TOLLIPQ9H0E2 274 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 IFI27L2Q9H2X8 130 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 RNF167Q9H6Y7 350 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 MOB4Q9Y3A3 225 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 NOTCH1P46531 2555 aa10.79□□□□□ -0.68
SHANK2-202ENST00000357171 SMIM30A4D0T7 59 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 METTL21EPA6NDL7 271 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 SERPINE3A8MV23 424 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 M0QZ24 198 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 HIST1H1DP16402 221 aaKnown RBP10.78□□□□□ -0.68
SHANK2-202ENST00000357171 TMEM11P17152 192 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 SCAND1P57086 179 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 SRSF7Q16629 238 aaKnown RBP eCLIP10.78□□□□□ -0.684e-9■■■■■ 29.7
SHANK2-202ENST00000357171 ABCA11PQ4W5N1 156 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 FAM71F2Q6NXP2 309 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 MOB3BQ86TA1 216 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 TGIF2LXQ8IUE1 241 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 LYG1Q8N1E2 194 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 ZNF251Q9BRH9 671 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 CHMP1AQ9HD42 196 aaPredicted RBP10.78□□□□□ -0.68
SHANK2-202ENST00000357171 PLSCR3Q9NRY6 295 aa10.78□□□□□ -0.68
SHANK2-202ENST00000357171 IGKV1-6A0A0C4DH72 117 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 LOC100506127A0A0U1RQW1 187 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 ZNF736B4DX44 427 aaPredicted RBP10.77□□□□□ -0.68
SHANK2-202ENST00000357171 RRP9O43818 475 aaKnown RBP10.77□□□□□ -0.68
SHANK2-202ENST00000357171 TMEM127O75204 238 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 DIRAS3O95661 229 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 LPLP06858 475 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 SCTP09683 121 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 CLEC2LP0C7M8 214 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 VSIG10L2P0DP72 767 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 GNB3P16520 340 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 VDAC2P45880 294 aaPredicted RBP10.77□□□□□ -0.68
SHANK2-202ENST00000357171 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 Q6ZS49 121 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 OR2AK2Q8NG84 335 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 IL1F10Q8WWZ1 152 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 GHITMQ9H3K2 345 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 SLC23A1Q9UHI7 598 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 DAPK2Q9UIK4 370 aa10.77□□□□□ -0.68
SHANK2-202ENST00000357171 SAA2-SAA4A0A096LPE2 208 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 IGHV3-72A0A0B4J1Y9 119 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 TRDCB7Z8K6 153 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 FCGR3AP08637 254 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 SAA2P0DJI9 122 aaPredicted RBP10.77□□□□□ -0.69
SHANK2-202ENST00000357171 ZBTB25P24278 435 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 LSAMPQ13449 338 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 HES1Q14469 280 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 OR4A4PQ8NGN8 299 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 SETD6Q8TBK2 473 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 PARP12Q9H0J9 701 aaKnown RBP10.77□□□□□ -0.69
SHANK2-202ENST00000357171 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 PIPOXQ9P0Z9 390 aa10.77□□□□□ -0.69
SHANK2-202ENST00000357171 PLXNB1O43157 2135 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 PRKDCP78527 4128 aaKnown RBP10.76□□□□□ -0.69
SHANK2-202ENST00000357171 SH2D7A6NKC9 451 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-202ENST00000357171 ADARB2-AS1A8MUL3 147 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 MOSP00540 346 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 IGHG2P01859 326 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 CD3GP09693 182 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 CD28P10747 220 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 SNRPBP14678 240 aaKnown RBP10.76□□□□□ -0.69
SHANK2-202ENST00000357171 OR3A3P47888 321 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 MXD1Q05195 221 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 HNF4GQ14541 408 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 C2orf68Q2NKX9 166 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 Q8N9W7 124 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 LGALS14Q8TCE9 139 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 NABP2Q9BQ15 211 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 CABLES2Q9BTV7 478 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 C11orf54Q9H0W9 315 aaPredicted RBP10.76□□□□□ -0.69
SHANK2-202ENST00000357171 ATG5Q9H1Y0 275 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 MMP27Q9H306 513 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 OR1A1Q9P1Q5 309 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 ETV7Q9Y603 341 aa10.76□□□□□ -0.69
SHANK2-202ENST00000357171 RAB29O14966 203 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms