RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 F2RL2O00254 374 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 FABP7O15540 132 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TMEM127O75204 238 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 IGLV1-47P01700 117 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 GZMHP20718 246 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 PRTN3P24158 256 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TRIQKQ629K1 86 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 CLEC9AQ6UXN8 241 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 OVCH2Q7RTZ1 564 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 SMIM4Q8WVI0 70 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 RITA1Q96K30 269 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 SLC6A7Q99884 636 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 ZNF69Q9UC07 566 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 AUP1Q9Y679 476 aa3.27□□□□□ -1.89
LIG4-201ENST00000356922 TRBV6-7A0A0A0MS04 114 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 TRBV23-1A0A0A0MS06 115 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 A0A0A6YYH2 397 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 IGHV2-26A0A0B4J1V2 119 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 A6NJ64 397 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ST8SIA5O15466 376 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ENSAO43768 121 aaKnown RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 CD5LO43866 347 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 FSHBP01225 129 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 LPLP06858 475 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 REG1BP48304 166 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 BRWD1-AS2P59051 145 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 PITPNAQ00169 270 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 GPR157Q5UAW9 335 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 AADACL3Q5VUY0 350 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ABHD12Q8N2K0 398 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR4P4Q8NGL7 312 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ZNF251Q9BRH9 671 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 MS4A7Q9GZW8 240 aaPredicted RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 C11orf54Q9H0W9 315 aaPredicted RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR6C3Q9NZP0 311 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 UBE2J1Q9Y385 318 aaPredicted RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 A0A0U1RQK1 487 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR5H14A6NHG9 310 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 FAM25EA8MYX2 175 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 GABARAPH6UMI1 98 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ECDO95905 644 aaPredicted RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 IL7P13232 177 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 PI3P19957 117 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 FPR2P25090 351 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 BTCP35070 178 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 KCNJ3P48549 501 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 BAMBIQ13145 260 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 KLF9Q13886 244 aaPredicted RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 PLA1AQ53H76 456 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 RPL39P5Q59GN2 51 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 PYHIN1Q6K0P9 492 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR5AP2Q8NGF4 316 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR10X1Q8NGY0 326 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 PIFOQ8TCI5 191 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 UPRTQ96BW1 309 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 DUX5Q96PT3 197 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 TMEM133Q9H2Q1 129 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 GAL3ST2Q9H3Q3 398 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 METTL8Q9H825 291 aaKnown RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 UNKLQ9H9P5 680 aaKnown RBP3.26□□□□□ -1.89
LIG4-201ENST00000356922 RDH8Q9NYR8 311 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 IDI2-AS1Q9NZ38 188 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 TBC1D24Q9ULP9 559 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 BTBD17A6NE02 478 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 LY6LH3BQJ8 138 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 CTDSPLO15194 276 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 CA11O75493 328 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 RBBP9O75884 186 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR8U9P0C7N5 309 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 DTYMKP23919 212 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 SAA4P35542 130 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 HLA-DRB3P79483 266 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 STEAP3Q658P3 488 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 Q6ZNX1 250 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 Q6ZS49 121 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 C15orf40Q8WUR7 153 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 FCAMRQ8WWV6 532 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 ST6GALNAC6Q969X2 333 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 GALMQ96C23 342 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 IFI27L2Q9H2X8 130 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 NCOR1P1Q9H4R4 102 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 GFOD1Q9NXC2 390 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 TAS2R3Q9NYW6 316 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 HILPDAQ9Y5L2 63 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 KPTNQ9Y664 436 aa3.26□□□□□ -1.89
LIG4-201ENST00000356922 A0A087X0M5 115 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 TRAV20A0A0B4J274 112 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 A0A1B0GX30 115 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ANKRD20A5PA0PJZ0 165 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 ZNF729A6NN14 1252 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 A8MV72 311 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 ODF3BA8MYP8 253 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 J3QR06 171 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 GSTZ1O43708 216 aaPredicted RBP3.25□□□□□ -1.89
LIG4-201ENST00000356922 TUSC2O75896 110 aa3.25□□□□□ -1.89
LIG4-201ENST00000356922 OR5H8P0DN80 308 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms