RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SKP2Q13309 424 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 CYB561D1Q8N8Q1 229 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 PLPP3O14495 311 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TSPAN13O95857 204 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 GLULP15104 373 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 OR8B12Q8NGG6 310 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 HSPB9Q9BQS6 159 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 CA10Q9NS85 328 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 HILPDAQ9Y5L2 63 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TRGC2P03986 189 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 HMGCLL1Q8TB92 370 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TUBD1Q9UJT1 453 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 APC2O95996 2303 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TRAV39A0A0B4J263 110 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 A8MXK9 166 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 SLC35B1P78383 322 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 LILRA5A6NI73 299 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 PMELP40967 661 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 LINC01465Q8N7H1 131 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 CHODLQ9H9P2 273 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 A0A1B0GV90 55 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TMEM210A6NLX4 147 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 GABRG2P18507 467 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 NUBP1P53384 320 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 RTN4RL1Q86UN2 441 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 DPH3P1Q9H4G8 78 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 IL19Q9UHD0 177 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 KCNK7Q9Y2U2 307 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 OR51B2Q9Y5P1 312 aa10.08□□□□□ -0.8
SPTBN1-202ENST00000356805 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 LMX1BO60663 402 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 C1QAP02745 245 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 NPBWR2P48146 333 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 RIPPLY2Q5TAB7 128 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CT55Q8WUE5 264 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 COPS9Q8WXC6 57 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 DNAJB12Q9NXW2 375 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 MAGEA5P43359 124 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 PGFP49763 221 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CALHM1Q8IU99 346 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 OR4D9Q8NGE8 314 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 METTL26Q96S19 204 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 MRGPRFQ96AM1 343 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 ZNF735P0CB33 412 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 FHITP49789 147 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 MRPL58Q14197 206 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 FAM181AQ8N9Y4 354 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 OR4C13Q8NGP0 309 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 HIST1H4GQ99525 98 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 ZFP64Q9NPA5 681 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CDIPTO14735 213 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 ATP6V0CP27449 155 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 MAS1LP35410 378 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 METAP1P53582 386 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 RAE1P78406 368 aaKnown RBP10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 MMDQ15546 238 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 TMEM196Q5HYL7 178 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 SAPCD1Q5SSQ6 148 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CARFQ8N187 725 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 OR4C45A6NMZ5 311 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 CCL21O00585 134 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 FOLR2P14207 255 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 GGTLC2Q14390 218 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 ASB10Q8WXI3 467 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 TLNRD1Q9H1K6 362 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 ZNF665Q9H7R5 613 aa10.07□□□□□ -0.8
SPTBN1-202ENST00000356805 OR2A4O95047 310 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 PLAUP00749 431 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 LCN2P80188 198 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 KRTCAP3Q53RY4 240 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 OR2A7Q96R45 310 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 SLC25A10Q9UBX3 287 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 MRM2Q9UI43 246 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 DOCK11Q5JSL3 2073 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 PLXNB2O15031 1838 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 A8MWL6 223 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 FFAR1O14842 300 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 CD200R1LQ6Q8B3 271 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 PRSS41Q7RTY9 318 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 SPTY2D1-AS1A0A0U1RR47 76 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 IGHV4-34P06331 123 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 GAPTQ8N292 157 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 SIGLEC5O15389 551 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 LIPFP07098 398 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 GLIPR1P48060 266 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 TRA2AQ13595 282 aaKnown RBP eCLIP10.06□□□□□ -0.87e-7■□□□□ 9.9
SPTBN1-202ENST00000356805 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 NPIPB6E9PJ23 425 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 APOBEC4Q8WW27 367 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-202ENST00000356805 CLN8Q9UBY8 286 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms