RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 LINC01565O15544 149 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 GPR6P46095 362 aaPredicted RBP13.45□□□□□ -0.26
RTN3-205ENST00000356000 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
RTN3-205ENST00000356000 NMSQ5H8A3 153 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 SFRP2Q96HF1 295 aa13.45□□□□□ -0.26
RTN3-205ENST00000356000 ZNF324O75467 553 aaPredicted RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 CA2P00918 260 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 IGLL1P15814 213 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 ZNF83P51522 516 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 RRADP55042 308 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 CRIP3Q6Q6R5 217 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 ZNF525Q8N782 197 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 GATAD1Q8WUU5 269 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 NEUROG1Q92886 237 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 GMPPAQ96IJ6 420 aaPredicted RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 PNO1Q9NRX1 252 aaKnown RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 ABI3Q9P2A4 366 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 OR51B2Q9Y5P1 312 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 PHF3Q92576 2039 aaKnown RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 IGKV1-9A0A0C4DH69 117 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 CD5LO43866 347 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 PMCHP20382 165 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 RPS15AP62244 130 aaKnown RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 KRTCAP3Q53RY4 240 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 GATSQ8NAP1 163 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 SPSB1Q96BD6 273 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 VSTM2LQ96N03 204 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 LYRM4Q9HD34 91 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 PEF1Q9UBV8 284 aaKnown RBP13.44□□□□□ -0.26
RTN3-205ENST00000356000 WASHC3Q9Y3C0 194 aa13.44□□□□□ -0.26
RTN3-205ENST00000356000 H0YJW9 148 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 FCN1O00602 326 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 LATO43561 262 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 IGKV1D-33P01593 117 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 IGKV1-33P01594 117 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 NBL1P41271 181 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 RHOBP62745 196 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 TMEM267Q0VDI3 215 aaPredicted RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 TMEFF1Q8IYR6 380 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 ZNF295-AS1Q8N0V1 137 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 STXBP6Q8NFX7 210 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 OR10P1Q8NGE3 313 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 ALG1L2C9J202 215 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 M0R1X1 148 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 ZNF17P17021 662 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 OPRM1P35372 400 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 SGCBQ16585 318 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 UFSP1Q6NVU6 142 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 ZNF501Q96CX3 271 aaPredicted RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 UBE2J1Q9Y385 318 aaPredicted RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 NXPH3O95157 252 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 NUDT3O95989 172 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 FIGLAQ6QHK4 219 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 NEGR1Q7Z3B1 354 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 OR1K1Q8NGR3 316 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 CYB5D2Q8WUJ1 264 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 LIN37Q96GY3 246 aaPredicted RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 CLEC7AQ9BXN2 247 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
RTN3-205ENST00000356000 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 TAAR3PQ9P1P4 343 aa13.43□□□□□ -0.26
RTN3-205ENST00000356000 DOCK11Q5JSL3 2073 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 MUC21A0A0G2JKD1 596 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 MUC21A0A140T8X8 626 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 MT-CO2P00403 227 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 IGHMP01871 453 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 METAP1P53582 386 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 KISS1Q15726 138 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 IGFBP7Q16270 282 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 MUC21Q5SSG8 566 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 FNDC7Q5VTL7 733 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 TM4SF19Q96DZ7 209 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 HCSTQ9UBK5 93 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 CPAMD8Q8IZJ3 1885 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 MDFIC2A0A1B0GVS7 189 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 TRAPPC2LH3BP13 241 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 H3BP45 60 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 AZU1P20160 251 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 VDAC1P21796 283 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 SRD5A2P31213 254 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 RELBQ01201 579 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 LCN12Q6JVE5 192 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 RCHY1Q96PM5 261 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 RARRES3Q9UL19 164 aa13.42□□□□□ -0.26
RTN3-205ENST00000356000 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 RAB29O14966 203 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 PAGE4O60829 102 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 CRYBA4P53673 196 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 ZNF90Q03938 601 aa13.41□□□□□ -0.26
RTN3-205ENST00000356000 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.41□□□□□ -0.265e-6■■■□□ 15.4
RTN3-205ENST00000356000 C12orf54Q6X4T0 127 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms