RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 IL24Q13007 206 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 TUSC5Q8IXB3 177 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-202ENST00000355815 BCL2P10415 239 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 RIMS4Q9H426 269 aaPredicted RBP12.18□□□□□ -0.46
SREBF1-202ENST00000355815 RFPL3SP0C7P2 107 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 CD46P15529 392 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 ZNF708P17019 499 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 G6PCP35575 357 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 TFPI2P48307 235 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 HERPUD1Q15011 391 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 CLDN23Q96B33 292 aa12.18□□□□□ -0.46
SREBF1-202ENST00000355815 J3QR89 54 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 LIFP15018 202 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 GPR12P47775 334 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 RPS23P62266 143 aaKnown RBP12.17□□□□□ -0.46
SREBF1-202ENST00000355815 NHLH1Q02575 133 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 SAP25Q8TEE9 199 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 NPTNQ9Y639 398 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 B4DEV8 164 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 DEDDO75618 318 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 CEACAM6P40199 344 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 MAGEA5P43359 124 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 OR1C1Q15619 314 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 GABRA6Q16445 453 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 ALKBH6Q3KRA9 238 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 LY6G6FQ5SQ64 297 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 OR4A47Q6IF82 309 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 DNASE2BQ8WZ79 361 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 COA4Q9NYJ1 87 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 PCNX3Q9H6A9 2034 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 A6NNC1 897 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 MPLP40238 635 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
SREBF1-202ENST00000355815 RAC3P60763 192 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 RTP5Q14D33 572 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 MRGPRGQ86SM5 289 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 TINAGQ9UJW2 476 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 CYB5R3P00387 301 aaPredicted RBP12.17□□□□□ -0.46
SREBF1-202ENST00000355815 GNG4P50150 75 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
SREBF1-202ENST00000355815 HLA-GP17693 338 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 HOXA5P20719 270 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 DNAJC4Q9NNZ3 241 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 NPIPB7O75200 414 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 GAPDHP04406 335 aaKnown RBP12.16□□□□□ -0.46
SREBF1-202ENST00000355815 RAB35Q15286 201 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 C1orf210Q8IVY1 113 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 Q8WTZ3 238 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 ABHD14AQ9BUJ0 271 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 A0A0G2JMM0 328 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 A0A1W2PPB8 328 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 KIR3DP1A8MWS1 328 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 NDUFB4O95168 129 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 HRASP01112 189 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 CD8AP01732 235 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 FKBP2P26885 142 aaKnown RBP12.16□□□□□ -0.46
SREBF1-202ENST00000355815 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-202ENST00000355815 BTNL3Q6UXE8 466 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 ZDHHC23Q8IYP9 409 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 TRIB1Q96RU8 372 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 CACNA1BQ00975 2339 aa12.16□□□□□ -0.46
SREBF1-202ENST00000355815 NDUFA2O43678 99 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 FUT6P51993 359 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 C1orf100Q5SVJ3 147 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 SPSB1Q96BD6 273 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-202ENST00000355815 H0YIZ8 118 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
SREBF1-202ENST00000355815 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
SREBF1-202ENST00000355815 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-202ENST00000355815 ELOBQ15370 118 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 COLCA2A8K830 154 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 M0R1X1 148 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 FCGR3BO75015 233 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 TMEM50BP56557 158 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 SPCS3P61009 180 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 ZP4Q12836 540 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 EIF4E3Q8N5X7 224 aaKnown RBP12.15□□□□□ -0.46
SREBF1-202ENST00000355815 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.46
SREBF1-202ENST00000355815 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 IGLV3-19P01714 112 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 SELLP14151 372 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 PMS2CLQ68D20 193 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
SREBF1-202ENST00000355815 CARFQ8N187 725 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms