RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 TMEM54Q969K7 222 aa16.1■□□□□ 0.17
PRPF39-201ENST00000355765 DNAJC4Q9NNZ3 241 aa16.1■□□□□ 0.17
PRPF39-201ENST00000355765 TMEM106BQ9NUM4 274 aa16.1■□□□□ 0.17
PRPF39-201ENST00000355765 IL6RP08887 468 aaPredicted RBP16.09■□□□□ 0.17
PRPF39-201ENST00000355765 CD82P27701 267 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 FUT6P51993 359 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 PPP1CBP62140 327 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 ANKRD37Q7Z713 158 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 C11orf42Q8N5U0 333 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 NFAM1Q8NET5 270 aaPredicted RBP16.09■□□□□ 0.17
PRPF39-201ENST00000355765 TNFSF13O75888 250 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 TUSC2O75896 110 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 IGKV1-39P01597 117 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 IGKV1D-39P04432 117 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 NPPCP23582 126 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 MSX1P28360 303 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 SLC38A11Q08AI6 406 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 IMMP2LQ96T52 175 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 TPTE2P1Q5T6R2 138 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 WDYHV1Q96HA8 205 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 PXMP4Q9Y6I8 212 aa16.09■□□□□ 0.17
PRPF39-201ENST00000355765 SYNGR3O43761 229 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 C1QTNF9P0C862 333 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 MPLP40238 635 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 OR1F12Q8NHA8 337 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 HSPB9Q9BQS6 159 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 REPIN1Q9BWE0 567 aaKnown RBP16.08■□□□□ 0.16
PRPF39-201ENST00000355765 MSL2Q9HCI7 577 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 IL36GQ9NZH8 169 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 CFHR1Q03591 330 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 RNPS1Q15287 305 aaKnown RBP16.08■□□□□ 0.16
PRPF39-201ENST00000355765 TMEM42Q69YG0 159 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 C20orf144Q9BQM9 153 aa16.08■□□□□ 0.16
PRPF39-201ENST00000355765 ERRFI1Q9UJM3 462 aaPredicted RBP16.08■□□□□ 0.16
PRPF39-201ENST00000355765 ZNF816-ZNF321PA0A0X1KG74 233 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 YPEL1O60688 119 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 B4GALT1P15291 398 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 ZNF32P17041 273 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 RAB7AP51149 207 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 IL1F10Q8WWZ1 152 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 NEIL1Q96FI4 390 aaPredicted RBP16.07■□□□□ 0.16
PRPF39-201ENST00000355765 YPEL2Q96QA6 119 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 DERL1Q9BUN8 251 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 VAMP8Q9BV40 100 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 GPR27Q9NS67 375 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 UMODP07911 640 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 HNF1AP20823 631 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 CD38P28907 300 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 OR10G9Q8NGN4 311 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 OR10G7Q8NGN6 311 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 ASCL3Q9NQ33 180 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 FOXJ2Q9P0K8 574 aa16.07■□□□□ 0.16
PRPF39-201ENST00000355765 ESPL1Q14674 2120 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 NAPSAO96009 420 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 IGKV1-5P01602 117 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 UBE2G2P60604 165 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 HLA-BQ31612 363 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 ACSF3Q4G176 576 aaPredicted RBP16.06■□□□□ 0.16
PRPF39-201ENST00000355765 TEX43Q6ZNM6 134 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 C20orf204Q6ZNR8 217 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 UBALD1Q8TB05 177 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 TP53TG3Q9ULZ0 132 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 PPP1R3CQ9UQK1 317 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 TMEM183BQ1AE95 376 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 FOXL2NBQ6ZUU3 175 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 ARL6IP6Q8N6S5 226 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 ZNF114Q8NC26 417 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 HLA-CQ95604 372 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 FGF21Q9NSA1 209 aa16.06■□□□□ 0.16
PRPF39-201ENST00000355765 TRAV39A0A0B4J263 110 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 hCG_38984A0A1B0GV85 526 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 G3V3Y1 287 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 LCN2P80188 198 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 SGMS2Q8NHU3 365 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 ZDHHC11Q9H8X9 412 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 CTXND1A0A1B0GTU2 59 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 C11orf94C9JXX5 98 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 CLDN1O95832 211 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 CHRNB4P30926 498 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 FAM27BQ5VT28 67 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 LINC01551Q86U37 167 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 FGFBP3Q8TAT2 258 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 ALKBH3Q96Q83 286 aaPredicted RBP16.05■□□□□ 0.16
PRPF39-201ENST00000355765 TMEM9BQ9NQ34 198 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 LINC00310P59036 64 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 MMDQ15546 238 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 FFAR4Q5NUL3 377 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 RHBDD2Q6NTF9 364 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 PCSK4Q6UW60 755 aa16.05■□□□□ 0.16
PRPF39-201ENST00000355765 NUFIP2Q7Z417 695 aaKnown RBP16.05■□□□□ 0.16
PRPF39-201ENST00000355765 LOC102725191A0A1B0GVB3 256 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 F2Z2F3 143 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 SERF1AO75920 110 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 S100GP29377 79 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 RAB30Q15771 203 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 TMPRSS7Q7RTY8 843 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 TMEM144Q7Z5S9 345 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 ZNF501Q96CX3 271 aaPredicted RBP16.04■□□□□ 0.16
PRPF39-201ENST00000355765 OR51B6Q9H340 312 aa16.04■□□□□ 0.16
PRPF39-201ENST00000355765 CRIM1Q9NZV1 1036 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms