RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 C16orf97H3BN30 126 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 KCNAB3O43448 404 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 TJP1Q07157 1748 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 IRF3Q14653 427 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 SGK494Q96LW2 274 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 DIRC2Q96SL1 478 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 PRDM14Q9GZV8 571 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 SMOC1Q9H4F8 434 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 A0A1W2PS18 150 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 DRD3P35462 400 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 TFPI2P48307 235 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 LPAR2Q9HBW0 351 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 FSCN3Q9NQT6 498 aa12.95□□□□□ -0.34
LMX1B-201ENST00000355497 NDUFB4O95168 129 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 LHFPL5Q8TAF8 219 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 EID2BQ96D98 161 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 RPL27AP46776 148 aaKnown RBP12.94□□□□□ -0.34
LMX1B-201ENST00000355497 SRSF5Q13243 272 aaKnown RBP12.94□□□□□ -0.34
LMX1B-201ENST00000355497 NUDT10Q8NFP7 164 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 NUDT11Q96G61 164 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-201ENST00000355497 MUC1P15941 1255 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-201ENST00000355497 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 H0Y980 276 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.34
LMX1B-201ENST00000355497 MPDU1O75352 247 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 RUNX1Q01196 453 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 NRIP2Q9BQI9 281 aa12.94□□□□□ -0.34
LMX1B-201ENST00000355497 DLL1O00548 723 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 PPP1R17O96001 155 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 NUBP1P53384 320 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 TIMP4Q99727 224 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 GAPDHP04406 335 aaKnown RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 LILRA6Q6PI73 481 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 C9orf172C9J069 976 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 HRKO00198 91 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 GUCA2BQ16661 112 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF385CQ66K41 422 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 C1orf174Q8IYL3 243 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 WNT9BO14905 357 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 HLA-DQA1P01909 254 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 GPR6P46095 362 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 MMP16P51512 607 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 GCSAMQ8N6F7 178 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 OR8G5Q8NG78 346 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 OR1P1Q8NH06 330 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 TXNDC17Q9BRA2 123 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 MRPS18BQ9Y676 258 aaKnown RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 LIMS2Q7Z4I7 341 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 STPG3Q8N7X2 389 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
LMX1B-201ENST00000355497 METTL1Q9UBP6 276 aaKnown RBP12.93□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF79Q15937 498 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 MARS2Q96GW9 593 aaKnown RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 IGKV3D-15A0A087WSY6 115 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 IGKV3-15P01624 115 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 LINC00869P0C866 280 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 RPS20P60866 119 aaKnown RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 MEIG1Q5JSS6 88 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 OVCH2Q7RTZ1 564 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 UQCR10Q9UDW1 63 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 ARID1BQ8NFD5 2236 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 ZNF98A6NK75 572 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 LEPROTL1O95214 131 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 TRGC2P03986 189 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 CCL4P13236 92 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 PSG9Q00887 426 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 C2orf83Q53S99 150 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM45BQ96B21 275 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 RBKSQ9H477 322 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 TUBD1Q9UJT1 453 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 SF3B6Q9Y3B4 125 aaKnown RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 CEACAM21Q3KPI0 293 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 MRPL18Q9H0U6 180 aaKnown RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
LMX1B-201ENST00000355497 TMEM56-RWDD3S4R434 201 aa12.92□□□□□ -0.34
LMX1B-201ENST00000355497 MC5RP33032 325 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 ID4P47928 161 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 SELENOTP62341 195 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 BEND2Q8NDZ0 799 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 OR5AC2Q9NZP5 309 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 LAMB1P07942 1786 aa12.91□□□□□ -0.34
LMX1B-201ENST00000355497 FAM181BA6NEQ2 426 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms