RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 CRYBA1P05813 215 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 RAB13P51153 203 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 FOXF2Q12947 444 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 AWAT1Q58HT5 328 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 SLC25A24Q6NUK1 477 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 CXorf67Q86X51 503 aaPredicted RBP18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 UBALD1Q8TB05 177 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 ABHD14AQ9BUJ0 271 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 C7orf77A4D0Y5 90 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 C12orf77C9JDV5 145 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 GPR37O15354 613 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 FOLR2P14207 255 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 OR3A1P47881 315 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 CEBPDP49716 269 aaPredicted RBP18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 RHEBQ15382 184 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 SP5Q6BEB4 398 aaPredicted RBP18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 WDR82Q6UXN9 313 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 ZNF826PQ6ZT77 177 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 SCGB1C1Q8TD33 95 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 RBMXL1Q96E39 390 aaKnown RBP18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 EGLN1Q9GZT9 426 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 ZNF71Q9NQZ8 489 aaPredicted RBP18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 RFNGQ9Y644 331 aa18.72■□□□□ 0.59
NKX2-1-201ENST00000354822 M0R036 132 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 HBG1P69891 147 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 HBG2P69892 147 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 IZUMO4Q1ZYL8 232 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 SOHLH1Q5JUK2 328 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 FGFRL1Q8N441 504 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 ZNF610Q8N9Z0 462 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 OR1L1Q8NH94 360 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 NINJ1Q92982 152 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 MMP24Q9Y5R2 645 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 WNT9BO14905 357 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 SNRNP70P08621 437 aaKnown RBP18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 NBL1P41271 181 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 FABP6P51161 128 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 SMIM21Q3B7S5 101 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 AKIRIN2Q53H80 203 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 ZADH2Q8N4Q0 377 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 RNF150Q9ULK6 438 aa18.71■□□□□ 0.59
NKX2-1-201ENST00000354822 EP300Q09472 2414 aaPredicted RBP18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 A0A1B0GV50 99 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 A0A1B0GWJ7 208 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 H3BP45 60 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 TNFSF13O75888 250 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 EIF2S3P41091 472 aaKnown RBP18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 RUNX1Q01196 453 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 AESQ08117 197 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 BEND4Q6ZU67 534 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 THNSL2Q86YJ6 484 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 TCTEX1D1Q8N7M0 179 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 CD300LFQ8TDQ1 290 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 STARD4Q96DR4 205 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 LURAP1Q96LR2 239 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 CLCC1Q96S66 551 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 SAV1Q9H4B6 383 aaPredicted RBP18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 BIN3Q9NQY0 253 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 DKK4Q9UBT3 224 aa18.7■□□□□ 0.58
NKX2-1-201ENST00000354822 IGHV2OR16-5A0A0B4J2B6 119 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 CGAP01215 116 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 HBZP02008 142 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 OR8U8P0C7N1 319 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 CCL20P78556 96 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 TMEM267Q0VDI3 215 aaPredicted RBP18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 CATR1Q13166 79 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 RNF212Q495C1 297 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 Q6ZR03 302 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 BHLHA15Q7RTS1 189 aaPredicted RBP18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 C14orf79Q96F83 325 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 RARRES2Q99969 163 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 URB1O60287 2271 aaKnown RBP18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 TRAV1-1A0A0B4J248 108 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 OR5H1A6NKK0 313 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 TM4SF5O14894 197 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 RTP5Q14D33 572 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 SFT2D1Q8WV19 159 aa18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 KLF2Q9Y5W3 355 aaPredicted RBP18.69■□□□□ 0.58
NKX2-1-201ENST00000354822 IGHV1-18A0A0C4DH31 117 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 MT-ND4LP03901 98 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 OR13C7P0DN81 318 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 GABRA2P47869 451 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 PRAMEF6Q5VXH4 476 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 COQ2Q96H96 371 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 PSMG3Q9BT73 122 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 OR2D2Q9H210 308 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 MBD3L4A6NDZ8 208 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 MBD3L3A6NE82 208 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 MBD3L5A6NJ08 208 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 IAPPP10997 89 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 PAX5Q02548 391 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 KRBOX4Q5JUW0 171 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 TRAT1Q6PIZ9 186 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 ETV3LQ6ZN32 361 aa18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 MBD3L2Q8NHZ7 208 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 PARD6GQ9BYG4 376 aaPredicted RBP18.68■□□□□ 0.58
NKX2-1-201ENST00000354822 UBE2KP61086 200 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 OR52L2PQ8NGH6 319 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 TAAR6Q96RI8 345 aa18.67■□□□□ 0.58
NKX2-1-201ENST00000354822 OPN3Q9H1Y3 402 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms