RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 DIAPH2-AS1Q14236 149 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 OR6Q1Q8NGQ2 317 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 OR10X1Q8NGY0 326 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 OR52I2Q8NH67 350 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 ZDHHC16Q969W1 377 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 MALSU1Q96EH3 234 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 PRDM13Q9H4Q3 707 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 SCPEP1Q9HB40 452 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 ANAPC10Q9UM13 185 aa17.93■□□□□ 0.46
SHMT1-203ENST00000354098 FABP12A6NFH5 140 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 PLA1AQ53H76 456 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 Q6YL49 198 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 OR10J5Q8NHC4 309 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 ABHD14AQ9BUJ0 271 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 RDH8Q9NYR8 311 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 KLK11Q9UBX7 282 aa17.92■□□□□ 0.46
SHMT1-203ENST00000354098 LEUTXA8MZ59 168 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 SULT1C2O00338 296 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 DGCR2P98153 550 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 LY6G6FQ5SQ64 297 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 PYHIN1Q6K0P9 492 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 CCDC190Q86UF4 302 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 OR2AK2Q8NG84 335 aa17.91■□□□□ 0.46
SHMT1-203ENST00000354098 ZNF418Q8TF45 676 aaPredicted RBP17.91■□□□□ 0.46
SHMT1-203ENST00000354098 ST8SIA5O15466 376 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 NAT1P18440 290 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 ARPC4P59998 168 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 TPTE2P1Q5T6R2 138 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 FAM131AQ6UXB0 335 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 RBMS3Q6XE24 437 aaKnown RBP17.9■□□□□ 0.46
SHMT1-203ENST00000354098 LYSMD2Q8IV50 215 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 C15orf40Q8WUR7 153 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 C11orf54Q9H0W9 315 aaPredicted RBP17.9■□□□□ 0.46
SHMT1-203ENST00000354098 MEGF9Q9H1U4 602 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 ESM1Q9NQ30 184 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 AMMECR1Q9Y4X0 333 aaPredicted RBP17.9■□□□□ 0.46
SHMT1-203ENST00000354098 V9GYH0 126 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 DIRAS3O95661 229 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 SRSF2Q01130 221 aaKnown RBP17.9■□□□□ 0.46
SHMT1-203ENST00000354098 PRIMA1Q86XR5 153 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 ODF3L1Q8IXM7 274 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 LYG1Q8N1E2 194 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 CREB3L1Q96BA8 519 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 DUX5Q96PT3 197 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 GINS4Q9BRT9 223 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 TOLLIPQ9H0E2 274 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 IFI27L2Q9H2X8 130 aa17.9■□□□□ 0.46
SHMT1-203ENST00000354098 HOXA3O43365 443 aaPredicted RBP17.89■□□□□ 0.45
SHMT1-203ENST00000354098 HLA-DMAP28067 261 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 CEACAM3P40198 252 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 RAB13P51153 203 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 BAMBIQ13145 260 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 LDLRAD3Q86YD5 345 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 H1FOOQ8IZA3 346 aaPredicted RBP17.89■□□□□ 0.45
SHMT1-203ENST00000354098 OR5AP2Q8NGF4 316 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 FCAMRQ8WWV6 532 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 ST6GALNAC6Q969X2 333 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 AGMATQ9BSE5 352 aa17.89■□□□□ 0.45
SHMT1-203ENST00000354098 JMJD1CQ15652 2540 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 GABARAPH6UMI1 98 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 VENTXO95231 258 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 IGHV4-59P01825 116 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 CTXN2P0C2S0 81 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 NFYAP23511 347 aaPredicted RBP17.88■□□□□ 0.45
SHMT1-203ENST00000354098 IER3P46695 156 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 REG1BP48304 166 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 HILS1P60008 231 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 RPEQ96AT9 228 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 TNFRSF19Q9NS68 423 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 RNF150Q9ULK6 438 aa17.88■□□□□ 0.45
SHMT1-203ENST00000354098 CTDSPLO15194 276 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 TCF21O43680 179 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 IFNA2P01563 188 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 PMP2P02689 132 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 RFX2P48378 723 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 ZDHHC22Q8N966 263 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 TOMM40LQ969M1 308 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 ABHD14BQ96IU4 210 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 SSX3Q99909 188 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 RABL2AQ9UBK7 228 aaPredicted RBP17.87■□□□□ 0.45
SHMT1-203ENST00000354098 MTFP1Q9UDX5 166 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 RABL2BQ9UNT1 228 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 ITGB1BP1O14713 200 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 RBBP9O75884 186 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 RCVRNP35243 200 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 OR3A3P47888 321 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 MRPS10P82664 201 aaKnown RBP17.87■□□□□ 0.45
SHMT1-203ENST00000354098 ZNF79Q15937 498 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 SMIM4Q8WVI0 70 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 EDARADDQ8WWZ3 215 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 NECAP2Q9NVZ3 263 aa17.87■□□□□ 0.45
SHMT1-203ENST00000354098 DNAJC9-AS1A6NH13 148 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 J3QRK9 145 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 HSD17B6O14756 317 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 OR8U9P0C7N5 309 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 OR5H8P0DN80 308 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 ETV6P41212 452 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 CDK10Q15131 360 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 SLC9A3R2Q15599 337 aa17.86■□□□□ 0.45
SHMT1-203ENST00000354098 OR8U1Q8NH10 309 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms