RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 A0A1W2PR80 420 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 NXPH2O95156 264 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 IGLV2-14P01704 120 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 MEOX1P50221 254 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 SERF2P84101 59 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 DCAF10Q5QP82 559 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 ZNF497Q6ZNH5 498 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 VASH2Q86V25 355 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.77
DDX4-201ENST00000353507 GGACTQ9BVM4 153 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 MED13Q9UHV7 2174 aa10.27□□□□□ -0.77
DDX4-201ENST00000353507 UBE2L5PA0A1B0GUS4 154 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 RNF212BA8MTL3 300 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 CEBPZOSA8MTT3 80 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 IL18BPO95998 194 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 CEACAM6P40199 344 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 LRRC75BQ2VPJ9 315 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 TMEM41BQ5BJD5 291 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 TMEM164Q5U3C3 297 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 MBD3L1Q8WWY6 194 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 GAR1Q9NY12 217 aaKnown RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 URB1O60287 2271 aaKnown RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 MAP1LC3B2A6NCE7 125 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 SLC38A11Q08AI6 406 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 ZNF726P1Q15940 193 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 C1orf210Q8IVY1 113 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 SCCPDHQ8NBX0 429 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 MAP1LC3BQ9GZQ8 125 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 KLF13Q9Y2Y9 288 aaPredicted RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 CLDN34H7C241 214 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BKO60814 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 CLDN1O95832 211 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 CYB5R3P00387 301 aaPredicted RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 TRGC2P03986 189 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BJP06899 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BOP23527 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BBP33778 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BDP58876 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BCP62807 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST2H2BEQ16778 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 ZNF585BQ52M93 769 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 FAM209BQ5JX69 171 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 FBXW9Q5XUX1 488 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 OR8G2PQ6IF36 304 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HAPLN4Q86UW8 402 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 DRAM1Q8N682 238 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 OR13D1Q8NGV5 346 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 BCL2L2Q92843 193 aaPredicted RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BHQ93079 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 FAM210BQ96KR6 192 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 P2RX4Q99571 388 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BNQ99877 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 HIST1H2BMQ99879 126 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 GPR87Q9BY21 358 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 WDR61Q9GZS3 305 aaKnown RBP10.26□□□□□ -0.77
DDX4-201ENST00000353507 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
DDX4-201ENST00000353507 IGHV3-64DA0A0J9YX35 117 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 C21orf140B9A014 251 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SH2D1BO14796 132 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 PPP1R2P9O14990 202 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 MRPL49Q13405 166 aaKnown RBP10.25□□□□□ -0.77
DDX4-201ENST00000353507 SSX7Q7RTT5 188 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 MRGPRGQ86SM5 289 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 OR4C12Q96R67 309 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 CDX2Q99626 313 aaPredicted RBP10.25□□□□□ -0.77
DDX4-201ENST00000353507 PRO3102Q9H379 93 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 CDH20Q9HBT6 801 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SEC14L6B5MCN3 397 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 KLRC4-KLRK1H3BQV0 150 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SP1P08047 785 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SLC10A1Q14973 349 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SPNS3Q6ZMD2 512 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 WDR86Q86TI4 376 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 CA5BP1Q8WTZ4 195 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 SPRY4Q9C004 299 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 KCNIP1Q9NZI2 227 aa10.25□□□□□ -0.77
DDX4-201ENST00000353507 KNTC1P50748 2209 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 CDIPTO14735 213 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 IGHV2-70P01814 119 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 PPP1CBP62140 327 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 ACSF3Q4G176 576 aaPredicted RBP10.24□□□□□ -0.77
DDX4-201ENST00000353507 FIP1L1Q6UN15 594 aaKnown RBP10.24□□□□□ -0.77
DDX4-201ENST00000353507 FGFRL1Q8N441 504 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 TAF15Q92804 592 aaKnown RBP eCLIP10.24□□□□□ -0.77
DDX4-201ENST00000353507 LHX4Q969G2 390 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 OR2J1Q9GZK6 312 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 SLC39A9Q9NUM3 307 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 PGA5P0DJD9 388 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 RAC2P15153 192 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 HNF4GQ14541 408 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 RBKSQ9H477 322 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 GP6Q9HCN6 339 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 SDF2L1Q9HCN8 221 aa10.24□□□□□ -0.77
DDX4-201ENST00000353507 MBNL3Q9NUK0 354 aaKnown RBP10.24□□□□□ -0.77
DDX4-201ENST00000353507 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
DDX4-201ENST00000353507 TGOLN2O43493 480 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms