RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 IGKV1-13P0DP09 117 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 CDX1P47902 265 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-204ENST00000353317 RAB2AP61019 212 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 ID3Q02535 119 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 HERPUD1Q15011 391 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 IGFBP7Q16270 282 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 NMSQ5H8A3 153 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF474Q6S9Z5 364 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-204ENST00000353317 Q6ZT83 130 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF429Q86V71 674 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 FAM185AQ8N0U4 392 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 WDR31Q8NA23 367 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 FAM57AQ8TBR7 257 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 HS3ST6Q96QI5 342 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 SLC25A31Q9H0C2 315 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 OR51B6Q9H340 312 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 WSB1Q9Y6I7 421 aa7.29□□□□□ -1.24
TRIM55-204ENST00000353317 A0A087WWC5 75 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF816-ZNF321PA0A0X1KG74 233 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 CLEC18AA5D8T8 446 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 CHST1O43916 411 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 NDUFA6P56556 154 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 PCBD1P61457 104 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 VAMP2P63027 116 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF154Q13106 437 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 CXorf67Q86X51 503 aaPredicted RBP7.28□□□□□ -1.24
TRIM55-204ENST00000353317 CLEC18CQ8NCF0 446 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 CLDND2Q8NHS1 167 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 PLPPR1Q8TBJ4 325 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 SPIN2AQ99865 258 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 SPIN2BQ9BPZ2 258 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 C1QTNF5Q9BXJ0 243 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 SH3BGRL2Q9UJC5 107 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF391Q9UJN7 358 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 COL12A1Q99715 3063 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 TGIF2-C20orf24A0A0A6YYL0 155 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 LILRA1O75019 489 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 TK1P04183 234 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
TRIM55-204ENST00000353317 COX5AP20674 150 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 VDAC1P21796 283 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 PAX9P55771 341 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 ZNF674Q2M3X9 581 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 KRTCAP3Q53RY4 240 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 C1orf185Q5T7R7 199 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 Q9N2K0 584 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 DMRT1Q9Y5R6 373 aa7.28□□□□□ -1.24
TRIM55-204ENST00000353317 HSPB6O14558 160 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 TNFSF12O43508 249 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BKO60814 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 NAPSAO96009 420 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BJP06899 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 BCL3P20749 454 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BOP23527 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 UCP1P25874 307 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BBP33778 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BDP58876 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BCP62807 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 LY6DQ14210 128 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST2H2BEQ16778 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 OR2B11Q5JQS5 317 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF506Q5JVG8 444 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 AKR1C8PQ5T2L2 129 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 PCSK4Q6UW60 755 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 SPNS3Q6ZMD2 512 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 Q6ZS49 121 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ZCCHC14Q8WYQ9 949 aaKnown RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BHQ93079 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 GNPNAT1Q96EK6 184 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BNQ99877 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 HIST1H2BMQ99879 126 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 NIPSNAP3BQ9BS92 247 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 FGF23Q9GZV9 251 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 CCL28Q9NRJ3 127 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 TAAR3PQ9P1P4 343 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 IL36RNQ9UBH0 155 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 RNF115Q9Y4L5 304 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ZFYVE26Q68DK2 2539 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 IGKV1-6A0A0C4DH72 117 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 C3orf80F5H4A9 247 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 H3BP45 60 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 CYB5BO43169 146 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 TRGC2P03986 189 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 CEACAM8P31997 349 aaPredicted RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 UCNP55089 124 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ERVS71-1P61550 626 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 RPL23AP62750 156 aaKnown RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 BAXQ07812 192 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 C9orf152Q5JTZ5 239 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 CMTM1Q8IZ96 169 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 Q8NFD4 153 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 SPSB4Q96A44 273 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 TVP23CQ96ET8 276 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ABHD14BQ96IU4 210 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 GAR1Q9NY12 217 aaKnown RBP7.27□□□□□ -1.25
TRIM55-204ENST00000353317 ZNF835Q9Y2P0 537 aa7.27□□□□□ -1.25
TRIM55-204ENST00000353317 A0A0G2JNJ9 132 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms