RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.53
TRIM4-201ENST00000349062 RARRES2Q99969 163 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 GGACTQ9BVM4 153 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 DNAJB11Q9UBS4 358 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 ABCA1O95477 2261 aa11.77□□□□□ -0.53
TRIM4-201ENST00000349062 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 PSPNO60542 156 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
TRIM4-201ENST00000349062 COX5BP10606 129 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 IL2RGP31785 369 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 EDDM3BP56851 147 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 TLE1Q04724 770 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 SOHLH1Q5JUK2 328 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 ZNF343Q6P1L6 599 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 Q6ZSR3 168 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 OR1L1Q8NH94 360 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 UBE2CO00762 179 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 MLNRO43193 412 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 IFNA17P01571 189 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 SULT1A2P50226 295 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 SURF2Q15527 256 aaPredicted RBP11.76□□□□□ -0.53
TRIM4-201ENST00000349062 ZNF383Q8NA42 475 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 CHD3Q12873 2000 aaKnown RBP11.76□□□□□ -0.53
TRIM4-201ENST00000349062 KIR2DS1A0A191URI9 304 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 ST8SIA3O43173 380 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 HEXAP06865 529 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 KIR2DS4P43632 304 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 KIR2DS1Q14954 304 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 BTNL8Q6UX41 500 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 BHLHA15Q7RTS1 189 aaPredicted RBP11.76□□□□□ -0.53
TRIM4-201ENST00000349062 OR52L2PQ8NGH6 319 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 STARD4Q96DR4 205 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 IL36GQ9NZH8 169 aa11.76□□□□□ -0.53
TRIM4-201ENST00000349062 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 JTBO76095 146 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 CD5P06127 495 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 FBP1P09467 338 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 PPP1CCP36873 323 aaKnown RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 PMELP40967 661 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 NKX2-1P43699 371 aaPredicted RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 ZNF816Q0VGE8 651 aaPredicted RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 WDR31Q8NA23 367 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 SH2D1BO14796 132 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 HAND1O96004 215 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 BEND4Q6ZU67 534 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 WFDC8Q8IUA0 241 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 SSTR5P35346 364 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 PRR30Q53SZ7 412 aaPredicted RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 DMBX1Q8NFW5 382 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 LRRC29Q8WV35 223 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
TRIM4-201ENST00000349062 MEGF10Q96KG7 1140 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 LRFN3Q9BTN0 628 aa11.75□□□□□ -0.53
TRIM4-201ENST00000349062 CEACAM1P13688 526 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 MDKP21741 143 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-201ENST00000349062 GLIPR1P48060 266 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 USF2Q15853 346 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-201ENST00000349062 MPV17LQ2QL34 196 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 ZNF718Q3SXZ3 478 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 POLDIP2Q9Y2S7 368 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 BORCS7-ASMTA0A0B4J1R7 106 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 A0A1B0GV90 55 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 CXorf65A6NEN9 183 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 DEDDO75618 318 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 NAPSAO96009 420 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 KRASP01116 189 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 SELLP14151 372 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 TAGLN2P37802 199 aaKnown RBP11.74□□□□□ -0.53
TRIM4-201ENST00000349062 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-201ENST00000349062 INO80CQ6PI98 192 aaPredicted RBP11.74□□□□□ -0.53
TRIM4-201ENST00000349062 SEM1Q6ZVN7 128 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 MUCL1Q96DR8 90 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 SUCNR1Q9BXA5 334 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 TMPRSS5Q9H3S3 457 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
TRIM4-201ENST00000349062 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 IGHV1-18A0A0C4DH31 117 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.73□□□□□ -0.53
TRIM4-201ENST00000349062 CEACAM18A8MTB9 384 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 PTBP3O95758 552 aaKnown RBP11.73□□□□□ -0.53
TRIM4-201ENST00000349062 C22orf34Q6ZV56 151 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 SSX9Q7RTT3 188 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 ABHD14BQ96IU4 210 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 METTL1Q9UBP6 276 aaKnown RBP11.73□□□□□ -0.53
TRIM4-201ENST00000349062 TP53TG5Q9Y2B4 290 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 WNK2Q9Y3S1 2297 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 AQP7O14520 342 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 CA11O75493 328 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 TNFSF13O75888 250 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 IGHG3P01860 377 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 ECI1P42126 302 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 Q6ZR03 302 aa11.73□□□□□ -0.53
TRIM4-201ENST00000349062 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms