RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 PARP11Q9NR21 331 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 FAM212BQ9NTI7 297 aaPredicted RBP17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 RNF115Q9Y4L5 304 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 KIAA2026Q5HYC2 2103 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 IGKV1D-17A0A075B6S4 117 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 APOC3P02656 99 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 SPP1P10451 314 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 EPHA1P21709 976 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 CD40P25942 277 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 GCSAMQ8N6F7 178 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 OR13A1Q8NGR1 328 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 RNASE11Q8TAA1 199 aaKnown RBP17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 NINJ1Q92982 152 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 CHD3Q12873 2000 aaKnown RBP17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 WRBO00258 174 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 CHST1O43916 411 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 TMEM50AO95807 157 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 ZNF16P17020 682 aaPredicted RBP17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 CCKARP32238 428 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 SELENOVP59797 346 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 TRAT1Q6PIZ9 186 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 TPRX1Q8N7U7 411 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 ELOVL5Q9NYP7 299 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 TMEM218A2RU14 115 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 SPRY3O43610 288 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 MSMO1Q15800 293 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 BTNL8Q6UX41 500 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 MOGAT3Q86VF5 341 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 MRPL37Q9BZE1 423 aaKnown RBP17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 MS4A7Q9GZW8 240 aaPredicted RBP17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 OR2D2Q9H210 308 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 ZNF835Q9Y2P0 537 aa17.03■□□□□ 0.32
CHRNA3-202ENST00000348639 PTPRQQ9UMZ3 2332 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 KIAA1324LA8MWY0 1029 aaPredicted RBP17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 LHBP01229 141 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 IGKV1-5P01602 117 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 SSTR5P35346 364 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 TMPRSS3P57727 454 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 Q6ZRM9 215 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 RNF150Q9ULK6 438 aa17.02■□□□□ 0.32
CHRNA3-202ENST00000348639 C16orf97H3BN30 126 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 NXPH3O95157 252 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 DANCRP0C864 163 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 GATA4P43694 442 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 AKR1C2P52895 323 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 F2RL1P55085 397 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 PAX9P55771 341 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 BAXQ07812 192 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 ZNF266Q14584 549 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 SWI5Q1ZZU3 235 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 ODF3L1Q8IXM7 274 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 PPP1R35Q8TAP8 253 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 ITLN1Q8WWA0 313 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 SNX22Q96L94 193 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 RAXQ9Y2V3 346 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 ABCD4O14678 606 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 SPINT2O43291 252 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 PPP1CCP36873 323 aaKnown RBP17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 ASCL1P50553 236 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 AKR1C1Q04828 323 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 EIF4EBP1Q13541 118 aaPredicted RBP17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 FAM53AQ6NSI3 398 aaPredicted RBP17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 Q6ZRG5 221 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 NUP37Q8NFH4 326 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 LYPD6BQ8NI32 183 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 COQ3Q9NZJ6 369 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 CACNG5Q9UF02 275 aa17.01■□□□□ 0.31
CHRNA3-202ENST00000348639 C15orf65H3BRN8 121 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 SRSF3P84103 164 aaKnown RBP17■□□□□ 0.31
CHRNA3-202ENST00000348639 HTD2P86397 168 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 EDDM3AQ14507 147 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 IZUMO4Q1ZYL8 232 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 TMEM108Q6UXF1 575 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 C5orf30Q96GV9 206 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 RAB40CQ96S21 281 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 PIEZO1Q92508 2521 aa17■□□□□ 0.31
CHRNA3-202ENST00000348639 NBEAQ8NFP9 2946 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 MGST3O14880 152 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 ADH4P08319 380 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 GZMHP20718 246 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 OMGP23515 440 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 CLINT1Q14677 625 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 HSD17B11Q8NBQ5 300 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 JKAMPQ9P055 326 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 IL19Q9UHD0 177 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 IGHV3OR15-7A0A075B7D8 119 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 ODAMA1E959 279 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 SIGLEC5O15389 551 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 RAB5CP51148 216 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 BTN1A1Q13410 526 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 CR1LQ2VPA4 569 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 WFDC8Q8IUA0 241 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 OR5C1Q8NGR4 320 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 LRRC46Q96FV0 321 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 SH3BGRL3Q9H299 93 aa16.99■□□□□ 0.31
CHRNA3-202ENST00000348639 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
CHRNA3-202ENST00000348639 PTAFRP25105 342 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms