RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 PMELP40967 661 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 BAXQ07812 192 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
SMTN-202ENST00000347557 PCSK4Q6UW60 755 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 SPSB4Q96A44 273 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 MUC3AQ02505 3323 aa12.41□□□□□ -0.42
SMTN-202ENST00000347557 DOCK11Q5JSL3 2073 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 DOCK10Q96BY6 2186 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 UBE2L5PA0A1B0GUS4 154 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 SYNGR2O43760 224 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 RBMXL2O75526 392 aaKnown RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 CDX1P47902 265 aaPredicted RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 KRTAP27-1Q3LI81 207 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 RBMXL1Q96E39 390 aaKnown RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 MALSU1Q96EH3 234 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 FAM210BQ96KR6 192 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 DLL3Q9NYJ7 618 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 RNF115Q9Y4L5 304 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 CTXN2P0C2S0 81 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 ADIRFQ15847 76 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 SSX7Q7RTT5 188 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.42
SMTN-202ENST00000347557 TMEM105Q8N8V8 129 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
SMTN-202ENST00000347557 CLDN1O95832 211 aa12.4□□□□□ -0.43
SMTN-202ENST00000347557 APLNRP35414 380 aa12.4□□□□□ -0.43
SMTN-202ENST00000347557 GFRA1P56159 465 aa12.4□□□□□ -0.43
SMTN-202ENST00000347557 SPINK9Q5DT21 86 aa12.4□□□□□ -0.43
SMTN-202ENST00000347557 RPUSD4Q96CM3 377 aaKnown RBP12.4□□□□□ -0.43
SMTN-202ENST00000347557 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.43
SMTN-202ENST00000347557 DLEU1O43261 78 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 CRYABP02511 175 aaKnown RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 SOD3P08294 240 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 GLIPR1P48060 266 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 CEBPDP49716 269 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 DUSP3P51452 185 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 ZXDAP98168 799 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 ZFP36L1Q07352 338 aaKnown RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 WDR25Q64LD2 544 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 FAM53AQ6NSI3 398 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 NUFIP2Q7Z417 695 aaKnown RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 SNX22Q96L94 193 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 PRSS50Q9UI38 385 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 CHTOPQ9Y3Y2 248 aaKnown RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 LOXL2Q9Y4K0 774 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 A0A1B0GW64 132 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 KRASP01116 189 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 GRPP07492 148 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 BMP5P22003 454 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 MRPS11P82912 194 aaKnown RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 KHDC3LQ587J8 217 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 C6orf15Q6UXA7 325 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 CXorf67Q86X51 503 aaPredicted RBP12.39□□□□□ -0.43
SMTN-202ENST00000347557 FRZBQ92765 325 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 TMEM208Q9BTX3 173 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 SMDT1Q9H4I9 107 aa12.39□□□□□ -0.43
SMTN-202ENST00000347557 CYC1P08574 325 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 OR5A2Q8NGI9 324 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 CABLES2Q9BTV7 478 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 NTN3O00634 580 aaPredicted RBP12.38□□□□□ -0.43
SMTN-202ENST00000347557 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 ZNF816Q0VGE8 651 aaPredicted RBP12.38□□□□□ -0.43
SMTN-202ENST00000347557 OR2M7Q8NG81 312 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 LHX4Q969G2 390 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
SMTN-202ENST00000347557 PRR14LQ5THK1 2151 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 A8MWP6 167 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 TFF1P04155 84 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 BCL2P10415 239 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 GNG3P63215 75 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 C1orf87Q8N0U7 546 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 RCC1LQ96I51 464 aaKnown RBP12.37□□□□□ -0.43
SMTN-202ENST00000347557 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 SLC39A9Q9NUM3 307 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 A0A1B0GU03 582 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 MAP1LC3B2A6NCE7 125 aa12.37□□□□□ -0.43
SMTN-202ENST00000347557 SERPINA7P05543 415 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms