RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 TCF21O43680 179 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 SYNGR3O43761 229 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 CCR5P51681 352 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 CLDN15P56746 228 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 TESK1Q15569 626 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 KRTAP27-1Q3LI81 207 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 TMEM9BQ9NQ34 198 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 ELOVL5Q9NYP7 299 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 IGKV1-6A0A0C4DH72 117 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 ITGB1BP1O14713 200 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 IAPPP10997 89 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 RBX1P62877 108 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 ACSM6Q6P461 480 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 C11orf42Q8N5U0 333 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 SLC35E1Q96K37 410 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 CHODLQ9H9P2 273 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 CACNG5Q9UF02 275 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 TP53TG3Q9ULZ0 132 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 ATP23Q9Y6H3 246 aa13.34□□□□□ -0.27
LRP8-202ENST00000347547 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 IGHV3-20A0A0C4DH32 117 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 LRP5LA4QPB2 252 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 SYNGR4O95473 234 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 TDGF1P13385 188 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 CHRNB4P30926 498 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 ADMP35318 185 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 CHRNA7P36544 502 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 SLC38A11Q08AI6 406 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 TRA2AQ13595 282 aaKnown RBP eCLIP13.33□□□□□ -0.28
LRP8-202ENST00000347547 YLPM1P49750 1951 aaKnown RBP13.33□□□□□ -0.28
LRP8-202ENST00000347547 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 SEC16AO15027 2179 aa13.33□□□□□ -0.28
LRP8-202ENST00000347547 UBE2L5PA0A1B0GUS4 154 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 A0A1B0GX78 115 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 CD300LBA8K4G0 201 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 MMP23AO75900 390 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 LINC00310P59036 64 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 OR4B1Q8NGF8 309 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
LRP8-202ENST00000347547 RBM24Q9BX46 236 aaKnown RBP13.32□□□□□ -0.28
LRP8-202ENST00000347547 PAM16Q9Y3D7 125 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 RP1P56715 2156 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 hCG_38984A0A1B0GV85 526 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 PSG2P11465 335 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 NPPCP23582 126 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 FAM180AQ6UWF9 173 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 CALHM1Q8IU99 346 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 ORAOV1Q8WV07 137 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 SLC25A22Q9H936 323 aa13.32□□□□□ -0.28
LRP8-202ENST00000347547 IGKV1-39P01597 117 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 IGKV1D-39P04432 117 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 COMPP49747 757 aaPredicted RBP13.31□□□□□ -0.28
LRP8-202ENST00000347547 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
LRP8-202ENST00000347547 PLCXD3Q63HM9 321 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 KIAA0895LQ68EN5 471 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 PCSK4Q6UW60 755 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
LRP8-202ENST00000347547 ZNF611Q8N823 705 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 GATAD1Q8WUU5 269 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 OR5P3Q8WZ94 311 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 TRAV9-1A0A075B6T8 112 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 FAM90A26D6RGX4 464 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 PDE6DO43924 150 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 LHX2P50458 406 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 BATFQ16520 125 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 ATP6V1FQ16864 119 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 ZNF324BQ6AW86 544 aaPredicted RBP13.31□□□□□ -0.28
LRP8-202ENST00000347547 FADS6Q8N9I5 356 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 OR10V1Q8NGI7 309 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 C22orf15Q8WYQ4 148 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 HSPB9Q9BQS6 159 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 METTL7AQ9H8H3 244 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 SLC45A2Q9UMX9 530 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 OR2W1Q9Y3N9 320 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
LRP8-202ENST00000347547 TRAV39A0A0B4J263 110 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 ZNF816-ZNF321PA0A0X1KG74 233 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 PAGE4O60829 102 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 VAMP5O95183 116 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 MSMO1Q15800 293 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 IZUMO4Q1ZYL8 232 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 RYDENQ9NUL5 291 aaKnown RBP13.3□□□□□ -0.28
LRP8-202ENST00000347547 PLA2G3Q9NZ20 509 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 KIAA2026Q5HYC2 2103 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 K7EP13 123 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 TNFSF11O14788 317 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 GALR2O43603 387 aaPredicted RBP13.3□□□□□ -0.28
LRP8-202ENST00000347547 IGKV1-5P01602 117 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 CDKN1AP38936 164 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 TFPI2P48307 235 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 TMEM249Q2WGJ8 235 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 ANKRD37Q7Z713 158 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 SAXO1Q8IYX7 474 aa13.3□□□□□ -0.28
LRP8-202ENST00000347547 ULBP2Q9BZM5 246 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms