RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 STARD4Q96DR4 205 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 ARHGEF17Q96PE2 2063 aaPredicted RBP9.4□□□□□ -0.9
CLCN6-202ENST00000346436 Q6ZT83 130 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 LHFPL5Q8TAF8 219 aa9.4□□□□□ -0.9
CLCN6-202ENST00000346436 ZNF385AQ96PM9 386 aaKnown RBP9.4□□□□□ -0.9
CLCN6-202ENST00000346436 SLC25A17O43808 307 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 LYPD3O95274 346 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 MT-ND4LP03901 98 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 HTN1P15515 57 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 NHLRC2Q8NBF2 726 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 ADIPOR1Q96A54 375 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 PHYHIPLQ96FC7 376 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 WDR13Q9H1Z4 485 aa9.4□□□□□ -0.91
CLCN6-202ENST00000346436 IGHV3OR15-7A0A075B7D8 119 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 J3QRE1 110 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 TSPAN2O60636 221 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 DEFA6Q01524 100 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 FAM27BQ5VT28 67 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SCARF2Q96GP6 870 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-202ENST00000346436 METTL26Q96S19 204 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 IGKV3-7A0A075B6H7 116 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 COMPP49747 757 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-202ENST00000346436 MMP16P51512 607 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 CDRT15L2A8MXV6 281 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 PPP1R2P9O14990 202 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SOX15O60248 233 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 POLR2GP62487 172 aaKnown RBP eCLIP9.39□□□□□ -0.91
CLCN6-202ENST00000346436 C8orf46Q8TAG6 207 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SNX22Q96L94 193 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SPSB2Q99619 263 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 TIMP4Q99727 224 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 TOX4O94842 621 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 OR2A4O95047 310 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 PGA3P0DJD8 388 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 LYZL2Q7Z4W2 148 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 OR8G5Q8NG78 346 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 OR2A7Q96R45 310 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 GFI1Q99684 422 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SSBP3Q9BWW4 388 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SLC25A22Q9H936 323 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 IFI6P09912 130 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 GLRXP35754 106 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 ARF6P62330 175 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 ROM1Q03395 351 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 OR5C1Q8NGR4 320 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 DUX5Q96PT3 197 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 NAA60Q9H7X0 242 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 SLC7A10Q9NS82 523 aa9.39□□□□□ -0.91
CLCN6-202ENST00000346436 IGKV1D-43A0A0B4J1Z2 117 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 M0QZK8 103 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 CORTO00230 105 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 RAB29O14966 203 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 CHST1O43916 411 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 OPN1MWP04001 364 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 OPN1MW2P0DN77 364 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 OPN1MW3P0DN78 364 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 COX5BP10606 129 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 ST6GALNAC3Q8NDV1 305 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 LHX4Q969G2 390 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 MED12Q93074 2177 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 SLC25A28Q96A46 364 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 ANXA10Q9UJ72 324 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 PLAURQ03405 335 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 ATP5G2Q06055 141 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 ZP4Q12836 540 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 ETV3LQ6ZN32 361 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 DNM1P46Q6ZS02 220 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 CLEC7AQ9BXN2 247 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 RTN4RQ9BZR6 473 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 PRSS50Q9UI38 385 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 TRAV39A0A0B4J263 110 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 OR2T8A6NH00 312 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
CLCN6-202ENST00000346436 TSPOP30536 169 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 BTNL8Q6UX41 500 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 PUSL1Q8N0Z8 303 aaKnown RBP9.38□□□□□ -0.91
CLCN6-202ENST00000346436 RAB40CQ96S21 281 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
CLCN6-202ENST00000346436 A0A1W2PNV4 684 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 FABP9Q0Z7S8 132 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 NSUN5P2Q63ZY6 315 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF787Q6DD87 383 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 MMD2Q8IY49 270 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 KLHDC3Q9BQ90 382 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 G6PC2Q9NQR9 355 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 PEMTQ9UBM1 199 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
CLCN6-202ENST00000346436 C3orf85A0A1B0GTC6 90 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 TSTD3H0UI37 97 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 SCGB1D1O95968 90 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 PMELP40967 661 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 RPL27AP46776 148 aaKnown RBP9.37□□□□□ -0.91
CLCN6-202ENST00000346436 ANKRD55Q3KP44 614 aa9.37□□□□□ -0.91
CLCN6-202ENST00000346436 AWAT1Q58HT5 328 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms