RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CD55P08174 381 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 KIR2DL2P43627 348 aaPredicted RBP11.28□□□□□ -0.6
CASC4-202ENST00000345795 UBE2KP61086 200 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 HLA-DRB3P79483 266 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 CATR1Q13166 79 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 PLGLAQ15195 96 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 POC1AQ8NBT0 407 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 AIFM2Q9BRQ8 373 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 HSPB1P04792 205 aaKnown RBP11.28□□□□□ -0.6
CASC4-202ENST00000345795 TMEM187Q14656 261 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 TMEM211Q6ICI0 200 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 FGFRL1Q8N441 504 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 DHRS9Q9BPW9 319 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 C19orf12Q9NSK7 152 aa11.28□□□□□ -0.6
CASC4-202ENST00000345795 HIVEP3Q5T1R4 2406 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 DTYMKP23919 212 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 COX7A1P24310 79 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 F2RP25116 425 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 ADIRFQ15847 76 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 SMUG1Q53HV7 270 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 TGIF2LYQ8IUE0 185 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 MOB3AQ96BX8 217 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 SH2D2AQ9NP31 389 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 UQCC1Q9NVA1 299 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 NAV3Q8IVL0 2385 aa11.27□□□□□ -0.6
CASC4-202ENST00000345795 hCG_1809904A0A1W2PP81 198 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 A0A1W2PR64 198 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 A0A1W2PRV1 198 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 EGR1P18146 543 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 TNFSF4P23510 183 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 Q6ZT83 130 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 FAM216BQ8N7L0 139 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 MDS2Q8NDY4 140 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 OR13A1Q8NGR1 328 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 RNF122Q9H9V4 155 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 LPAR2Q9HBW0 351 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.61
CASC4-202ENST00000345795 ZP3P21754 424 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 PRDX2P32119 198 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 ZNF266Q14584 549 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
CASC4-202ENST00000345795 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
CASC4-202ENST00000345795 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 PBDC1Q9BVG4 233 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 ARHGAP32A7KAX9 2087 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 NUP210LQ5VU65 1888 aa11.27□□□□□ -0.61
CASC4-202ENST00000345795 A0A1W2PPE2 198 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 DEDDO75618 318 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 SNAPC5O75971 98 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 SNAPINO95295 136 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 TAGLN2P37802 199 aaKnown RBP11.26□□□□□ -0.61
CASC4-202ENST00000345795 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 LHX4Q969G2 390 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PATZ1Q9HBE1 687 aaKnown RBP11.26□□□□□ -0.61
CASC4-202ENST00000345795 TMED3Q9Y3Q3 217 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PRR33A8MZF0 331 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 S1PR2O95136 353 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 VDAC1P21796 283 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PJVKQ0ZLH3 352 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 GABRA6Q16445 453 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 FAHD2BQ6P2I3 314 aaPredicted RBP11.26□□□□□ -0.61
CASC4-202ENST00000345795 FAHD2AQ96GK7 314 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 TM2D1Q9BX74 207 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 IGSF23A1L1A6 192 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 ETV2O00321 342 aaPredicted RBP11.26□□□□□ -0.61
CASC4-202ENST00000345795 TMEM222Q9H0R3 208 aa11.26□□□□□ -0.61
CASC4-202ENST00000345795 A0A0G2JRQ6 117 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 A0A1W2PPV4 95 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 SNCAP37840 140 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 AVPI1Q5T686 147 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 DOK5Q9P104 306 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 GPR137BO60478 399 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 F2RL1P55085 397 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 CASP6P55212 293 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 C10orf35Q96D05 121 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 PLEKHA2Q9HB19 425 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
CASC4-202ENST00000345795 FAM157AC9JC47 383 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 SYNGR2O43760 224 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 SPINK4O60575 86 aa11.24□□□□□ -0.61
CASC4-202ENST00000345795 CD8AP01732 235 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms