RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLC35E3Q7Z769 313 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 G6PC2Q9NQR9 355 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 FAM206AQ9NX38 181 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 IL36GQ9NZH8 169 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 PSME4Q14997 1843 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 AMTP48728 403 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 TCL1AP56279 114 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 FAM3BP58499 235 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 Q8WTZ3 238 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 NEIL1Q96FI4 390 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 ABHD14AQ9BUJ0 271 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 WDR54Q9H977 334 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 DNAJC4Q9NNZ3 241 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 CLN8Q9UBY8 286 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 TPRP12270 2363 aaKnown RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 IGHV1-45A0A0A0MS14 117 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 TMPRSS2O15393 492 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 SLC25A5P05141 298 aaKnown RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 SCTP09683 121 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 DANCRP0C864 163 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 HINT1P49773 126 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 RND3P61587 244 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 DCAF10Q5QP82 559 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 GFI1BQ5VTD9 330 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 SLC25A47Q6Q0C1 308 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 APOBEC4Q8WW27 367 aaKnown RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 AQP3Q92482 292 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 MOB3AQ96BX8 217 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 ANAPC16Q96DE5 110 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 HSD17B10Q99714 261 aaKnown RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 TMEM204Q9BSN7 226 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 TTTY12Q9BZ98 90 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 GPR132Q9UNW8 380 aa6.99□□□□□ -1.29
UBE4B-202ENST00000343090 KLF2Q9Y5W3 355 aaPredicted RBP6.99□□□□□ -1.29
UBE4B-202ENST00000343090 A0A087WV48 116 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 A6NNC1 897 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 FAM90A27PA6NNH2 459 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 J3QT63 122 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HSBP1O75506 76 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 TIAF1O95411 115 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 CRYABP02511 175 aaKnown RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HLA-GP17693 338 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 MRPS11P82912 194 aaKnown RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 OR5R1Q8NH85 324 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 PCGF1Q9BSM1 259 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 C11orf94C9JXX5 98 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 PAGE4O60829 102 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 RAMP1O60894 148 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 APELAP0DMC3 54 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 ORM2P19652 201 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 USF1P22415 310 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 GAS1P54826 345 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 FNDC7Q5VTL7 733 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 RNASEKQ6P5S7 137 aaKnown RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 SLC23A3Q6PIS1 610 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 BHLHA15Q7RTS1 189 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 BIVMQ86UB2 503 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 APCDD1LQ8NCL9 501 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 OR5A2Q8NGI9 324 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 SCARF2Q96GP6 870 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 C2orf88Q9BSF0 95 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 VAX2Q9UIW0 290 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 MBPP02686 304 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 C1orf100Q5SVJ3 147 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 TMEM56Q96MV1 263 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 CHD5Q8TDI0 1954 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 LTBP1Q14766 1721 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 A0A0U1RQV5 110 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BKO60814 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 ISG15P05161 165 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BJP06899 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BOP23527 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 FCER1GP30273 86 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 RHOBP62745 196 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
UBE4B-202ENST00000343090 MRPL37Q9BZE1 423 aaKnown RBP6.98□□□□□ -1.29
UBE4B-202ENST00000343090 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 A0A1B0GTI1 187 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 SPAARA0A1B0GVQ0 90 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 K7ERU9 68 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 CDS2O95674 445 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 SAPCD1Q5SSQ6 148 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 DMRTA2Q96SC8 542 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 MYOZ1Q9NP98 299 aaPredicted RBP6.97□□□□□ -1.29
UBE4B-202ENST00000343090 SLC2A8Q9NY64 477 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 CASP8AP2Q9UKL3 1982 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 B4E171 279 aa6.97□□□□□ -1.29
UBE4B-202ENST00000343090 DIRC3C9JPN6 131 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms