RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMEM255AQ5JRV8 349 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 TMEM78Q5T7P6 136 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 FAM24BQ8N5W8 94 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 A0A1W2PR77 199 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 CEACAM18A8MTB9 384 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 RGS13O14921 159 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 PF4P02776 101 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 IQCJQ1A5X6 159 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 HCP5Q6MZN7 132 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 STPG3Q8N7X2 389 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 MS4A10Q96PG2 267 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 PAXXQ9BUH6 204 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 ARID1AO14497 2285 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 GREM1O60565 184 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF137PP52743 207 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 FAM106AQ4KMX7 169 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 SOSTQ9BQB4 213 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 VAX2Q9UIW0 290 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 TRIP11Q15643 1979 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 M0R2Z0 102 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 CORTO00230 105 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 SLC25A47Q6Q0C1 308 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 ADAD2Q8NCV1 583 aaKnown RBP12.97□□□□□ -0.33
UBE3B-202ENST00000342494 OR2T10Q8NGZ9 312 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 PRSS27Q9BQR3 290 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 TOLLIPQ9H0E2 274 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 IGHV1-69-2A0A0G2JMI3 117 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 EFNB2P52799 333 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 CLRN3Q8NCR9 226 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 ELOVL5Q9NYP7 299 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 FOXH1O75593 365 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ZP3P21754 424 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 PRNTQ86SH4 94 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 GBGT1Q8N5D6 347 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 KLF14Q8TD94 323 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 hCG_38984A0A1B0GV85 526 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 WNT9BO14905 357 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 COX19Q49B96 90 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 DHRS11Q6UWP2 260 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 TCTEX1D1Q8N7M0 179 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ANAPC16Q96DE5 110 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 PDE6DO43924 150 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF253O75346 499 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 DCAF12L2Q5VW00 463 aa12.96□□□□□ -0.33
UBE3B-202ENST00000342494 MRPL54Q6P161 138 aaKnown RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 CENPVQ7Z7K6 275 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-202ENST00000342494 TRIOBPQ9H2D6 2365 aa12.96□□□□□ -0.34
UBE3B-202ENST00000342494 B9A039 149 aa12.96□□□□□ -0.34
UBE3B-202ENST00000342494 NANOS3P60323 173 aaKnown RBP12.96□□□□□ -0.34
UBE3B-202ENST00000342494 KCNK17Q96T54 332 aa12.96□□□□□ -0.34
UBE3B-202ENST00000342494 VPS25Q9BRG1 176 aa12.96□□□□□ -0.34
UBE3B-202ENST00000342494 NUP214P35658 2090 aaPredicted RBP12.96□□□□□ -0.34
UBE3B-202ENST00000342494 ZNF883P0CG24 379 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 CEBPDP49716 269 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-202ENST00000342494 FAM209AQ5JX71 171 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 LDLRAD3Q86YD5 345 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 SPSB2Q99619 263 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 CALYQ9NYX4 217 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 ST6GALNAC2Q9UJ37 374 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 ODAMA1E959 279 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 PSMB2P49721 201 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 RIPPLY2Q5TAB7 128 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 LRRC75AQ8NAA5 344 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 PTX4Q96A99 478 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 SLC25A33Q9BSK2 321 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 GSX1Q9H4S2 264 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-202ENST00000342494 NPVFQ9HCQ7 196 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 PPP1R32Q7Z5V6 425 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 FADS6Q8N9I5 356 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 IGHV3OR16-10A0A075B7F0 116 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 DLX1P56177 255 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 IGSF11Q5DX21 431 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 RHOVQ96L33 236 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 FAM181BA6NEQ2 426 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 ABHD12Q8N2K0 398 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 OR2D3Q8NGH3 330 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
UBE3B-202ENST00000342494 PCM1Q15154 2024 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 NUBP1P53384 320 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 LYRM7Q5U5X0 104 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 OVCH2Q7RTZ1 564 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 CEP290O15078 2479 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 LIPFP07098 398 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 PGA5P0DJD9 388 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 OR10J1P30954 320 aa12.94□□□□□ -0.34
UBE3B-202ENST00000342494 OR52M1Q8NGK5 317 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms