RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 IGKV1-39P01597 117 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 IGKV1D-39P04432 117 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 HEXAP06865 529 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 SERPINE2P07093 398 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 PPP1CCP36873 323 aaKnown RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 FLI1Q01543 452 aaPredicted RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 PEA15Q15121 130 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 KLF14Q8TD94 323 aaPredicted RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 SPENQ96T58 3664 aaKnown RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 IGHV1-18A0A0C4DH31 117 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 A0A1B0GU03 582 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 H7C2Y5 167 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 WRBO00258 174 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 SH2D1BO14796 132 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 IGLV1-44P01699 117 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 ZGRF1Q86YA3 2104 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 ZNF295-AS1Q8N0V1 137 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 OR2G3Q8NGZ4 309 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 RND1Q92730 232 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 MBNL3Q9NUK0 354 aaKnown RBP12.63□□□□□ -0.39
TPM3-208ENST00000341485 PPP1R3CQ9UQK1 317 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 WIPI2Q9Y4P8 454 aa12.63□□□□□ -0.39
TPM3-208ENST00000341485 IGF2RP11717 2491 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 TMEM210A6NLX4 147 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 KIAA1324LA8MWY0 1029 aaPredicted RBP12.62□□□□□ -0.39
TPM3-208ENST00000341485 SLC25A6P12236 298 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 ZNF83P51522 516 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 BAXQ07812 192 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 HMGN3Q15651 99 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 Q6ZRM9 215 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 TMEM217Q8N7C4 229 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 FAM169BQ8N8A8 192 aa12.62□□□□□ -0.39
TPM3-208ENST00000341485 EIF5A2Q9GZV4 153 aaKnown RBP12.62□□□□□ -0.39
TPM3-208ENST00000341485 A0A1B0GV50 99 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 M0R1B8 84 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 MLNRO43193 412 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 HSPA12AO43301 675 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 HAND1O96004 215 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 LY6DQ14210 128 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 ETV3LQ6ZN32 361 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 OR10Z1Q8NGY1 313 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 VKORC1Q9BQB6 163 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 HES4Q9HCC6 221 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 KCNS2Q9ULS6 477 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 WNT9BO14905 357 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 TSPAN9O75954 239 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 ZNF826PQ6ZT77 177 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 ST6GALNAC3Q8NDV1 305 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 ELOVL5Q9NYP7 299 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 OR14J1Q9UGF5 321 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 PRELID1Q9Y255 219 aa12.61□□□□□ -0.39
TPM3-208ENST00000341485 IGHV2OR16-5A0A0B4J2B6 119 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 PSPNO60542 156 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 CEACAM6P40199 344 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 HOXA4Q00056 320 aaPredicted RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 ZNF585BQ52M93 769 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 AKIRIN2Q53H80 203 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 OR8G5Q8NG78 346 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 RNASE11Q8TAA1 199 aaKnown RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 LSM10Q969L4 123 aaKnown RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 BCL2L14Q9BZR8 327 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 RBM7Q9Y580 266 aaKnown RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 PIEZO1Q92508 2521 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 KIAA2026Q5HYC2 2103 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 UMAD1C9J7I0 102 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 RUNX1Q01196 453 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 KDF1Q8NAX2 398 aaPredicted RBP12.6□□□□□ -0.39
TPM3-208ENST00000341485 LFNGQ8NES3 379 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 RXFP4Q8TDU9 374 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 ATP5SQ99766 215 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 CACNG5Q9UF02 275 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 MLXQ9UH92 298 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
TPM3-208ENST00000341485 BOD1L1Q8NFC6 3051 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 BSNQ9UPA5 3926 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 PIGBOS1A0A0B4J2F0 54 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 H3BP45 60 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 TXNL1O43396 289 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 TUBG1P23258 451 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 CCL20P78556 96 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 SPSB3Q6PJ21 355 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 DRAM1Q8N682 238 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 TUBG2Q9NRH3 451 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 PRR14LQ5THK1 2151 aa12.59□□□□□ -0.39
TPM3-208ENST00000341485 A0A1B0GW64 132 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.39
TPM3-208ENST00000341485 COLCA2A8K830 154 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 C16orf97H3BN30 126 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 GPR37O15354 613 aa12.58□□□□□ -0.39
TPM3-208ENST00000341485 ZNF16P17020 682 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms