RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 CCL4P13236 92 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 AADACP22760 399 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 OMGP23515 440 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 SRP14P37108 136 aaKnown RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 EMP2P54851 167 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 RPL18Q07020 188 aaKnown RBP10.16□□□□□ -0.78
RTN3-203ENST00000341307 SP6Q3SY56 376 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 C1orf140Q5VVS0 124 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 OR2C3Q8N628 320 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 PARLQ9H300 379 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 VDAC3Q9Y277 283 aa10.16□□□□□ -0.78
RTN3-203ENST00000341307 TMEM14DPA8MWL7 114 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 C11orf98E9PRG8 122 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 G3V3Y1 287 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 TAX1BP3O14907 124 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 HIST1H1DP16402 221 aaKnown RBP10.15□□□□□ -0.78
RTN3-203ENST00000341307 TMEM50BP56557 158 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 CLDN17P56750 224 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 ARG2P78540 354 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 SCGB2A2Q13296 93 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 MSMO1Q15800 293 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 SAMD13Q5VXD3 122 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 ODF3L1Q8IXM7 274 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 C20orf196Q8IYI0 205 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 LRRC75AQ8NAA5 344 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 PSMF1Q92530 271 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 NAT6Q93015 286 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 TMEM186Q96B77 213 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 TMEM14AQ9Y6G1 99 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 ALPK2Q86TB3 2170 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 CEBPZOSA8MTT3 80 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 ZNF93P35789 620 aaPredicted RBP10.15□□□□□ -0.78
RTN3-203ENST00000341307 LCN2P80188 198 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 CNN3Q15417 329 aaKnown RBP10.15□□□□□ -0.78
RTN3-203ENST00000341307 ZNF787Q6DD87 383 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 RNF144BQ7Z419 303 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 OR4F17Q8NGA8 305 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 PLPPR1Q8TBJ4 325 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.78
RTN3-203ENST00000341307 OR4F4Q96R69 305 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 ST6GALNAC5Q9BVH7 336 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 RBM24Q9BX46 236 aaKnown RBP10.15□□□□□ -0.78
RTN3-203ENST00000341307 CDC42EP3Q9UKI2 254 aa10.15□□□□□ -0.78
RTN3-203ENST00000341307 DMXL2Q8TDJ6 3036 aa10.15□□□□□ -0.79
RTN3-203ENST00000341307 OR2T8A6NH00 312 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 G3V4G9 280 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 KBTBD11O94819 623 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 SERPINA7P05543 415 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 KRTDAPP60985 99 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 CSNK2A1P68400 391 aaPredicted RBP10.14□□□□□ -0.79
RTN3-203ENST00000341307 TLE3Q04726 772 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 TMEM187Q14656 261 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 ZNF726P1Q15940 193 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 TCF23Q7RTU1 214 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
RTN3-203ENST00000341307 SULF2Q8IWU5 870 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 LGI3Q8N145 548 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 CSNK2A3Q8NEV1 391 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 OR5C1Q8NGR4 320 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 TSPAN32Q96QS1 320 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 KLHL13Q9P2N7 655 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 LOC107986453A0A1B0GWG9 222 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 A0A1W2PQD3 144 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 SHISA8B8ZZ34 492 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 F2Z2F3 143 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 GNG7O60262 68 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 CELA2AP08217 269 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 CD59P13987 128 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 IL11P20809 199 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 SLC6A8P48029 635 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 LHX2P50458 406 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 SNU13P55769 128 aaKnown RBP10.14□□□□□ -0.79
RTN3-203ENST00000341307 PAX2Q02962 417 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 LRRC10Q5BKY1 277 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 TMEM144Q7Z5S9 345 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 SELENOHQ8IZQ5 122 aaKnown RBP10.14□□□□□ -0.79
RTN3-203ENST00000341307 TMEM217Q8N7C4 229 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 ZIC4Q8N9L1 334 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 FAM216AQ8WUB2 273 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 ANAPC16Q96DE5 110 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 FOXN4Q96NZ1 517 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 PCNX2A6NKB5 2137 aa10.14□□□□□ -0.79
RTN3-203ENST00000341307 PPIAL4EA0A075B759 164 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 PPIAL4CA0A0B4J2A2 164 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 A0A0U1RQK1 487 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 PPIAL4DF5H284 164 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 ONECUT2O95948 504 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 WNT2P09544 360 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 PPIAL4FP0DN26 164 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 GP1BBP13224 206 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 PGCP20142 388 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 DUSP1P28562 367 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 DYNLT3P51808 116 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 SRPXP78539 464 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 FAM78BQ5VT40 261 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
RTN3-203ENST00000341307 CPEB2Q7Z5Q1 589 aaKnown RBP10.13□□□□□ -0.79
RTN3-203ENST00000341307 ASB10Q8WXI3 467 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms