RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 BET1LQ9NYM9 111 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 NPIPB13A6NJU9 1138 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 NPIPB4C9JG80 1138 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 SRSF10O75494 262 aaKnown RBP12.8□□□□□ -0.36
RRP1B-201ENST00000340648 TNFSF15O95150 251 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 USF1P22415 310 aaPredicted RBP12.8□□□□□ -0.36
RRP1B-201ENST00000340648 DDA1Q9BW61 102 aa12.8□□□□□ -0.36
RRP1B-201ENST00000340648 TP53BP1Q12888 1972 aaPredicted RBP12.79□□□□□ -0.36
RRP1B-201ENST00000340648 SLC25A5P05141 298 aaKnown RBP12.79□□□□□ -0.36
RRP1B-201ENST00000340648 FAM157CP0CG43 387 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 UBE2L3P68036 154 aaKnown RBP12.79□□□□□ -0.36
RRP1B-201ENST00000340648 BLNKQ8WV28 456 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 CFHR5Q9BXR6 569 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 M0R2Z0 102 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 DNPH1O43598 174 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 REC114Q7Z4M0 266 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 P2RX4Q99571 388 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 ST8SIA5O15466 376 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 SSPNQ14714 243 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 MARS2Q96GW9 593 aaKnown RBP12.79□□□□□ -0.36
RRP1B-201ENST00000340648 HSPB9Q9BQS6 159 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 FAM117AQ9C073 453 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 EGLN1Q9GZT9 426 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 CBLN4Q9NTU7 201 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 SRP19P09132 144 aaKnown RBP12.79□□□□□ -0.36
RRP1B-201ENST00000340648 SPSB2Q99619 263 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 RPRMQ9NS64 109 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 ZDHHC8Q9ULC8 765 aa12.79□□□□□ -0.36
RRP1B-201ENST00000340648 CEP290O15078 2479 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 MST1P26927 711 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 LINC00596Q86U02 117 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TIMP4Q99727 224 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 LRRC3CA6NJW4 275 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 EFEMP2O95967 443 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
RRP1B-201ENST00000340648 SLC35B1P78383 322 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TRAT1Q6PIZ9 186 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TPRX1Q8N7U7 411 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 Q8WTZ3 238 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 SRD5A3Q9H8P0 318 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TCFL5Q9UL49 500 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 CXorf1O96002 111 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 UCP3P55916 312 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 HOXA5P20719 270 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 CD1BP29016 333 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 TM2D1Q9BX74 207 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 CXXC4Q9H2H0 198 aa12.78□□□□□ -0.36
RRP1B-201ENST00000340648 COLCA2A8K830 154 aa12.77□□□□□ -0.36
RRP1B-201ENST00000340648 ZPBPQ9BS86 351 aa12.77□□□□□ -0.36
RRP1B-201ENST00000340648 ABHD14AQ9BUJ0 271 aa12.77□□□□□ -0.36
RRP1B-201ENST00000340648 WDR61Q9GZS3 305 aaKnown RBP12.77□□□□□ -0.36
RRP1B-201ENST00000340648 TECRQ9NZ01 308 aaKnown RBP12.77□□□□□ -0.36
RRP1B-201ENST00000340648 LOC390937A0A1W2PQ73 354 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 HELTA6NFD8 242 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 DIRC3C9JPN6 131 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 CHRNB4P30926 498 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 CSN1S1P47710 185 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ZNF83P51522 516 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 CT55Q8WUE5 264 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 GALNT14Q96FL9 552 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ELOBQ15370 118 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ZNF766Q5HY98 468 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 FGFRL1Q8N441 504 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 OR52L2PQ8NGH6 319 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 PARLQ9H300 379 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 CYTL1Q9NRR1 136 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 A0A0A6YYD4 124 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
RRP1B-201ENST00000340648 TCF21O43680 179 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ADH4P08319 380 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 FCER1GP30273 86 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 RAB7AP51149 207 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 ZADH2Q8N4Q0 377 aa12.77□□□□□ -0.37
RRP1B-201ENST00000340648 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 ZBTB34Q8NCN2 500 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 RAB24Q969Q5 203 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 UBE2CO00762 179 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 RNF224P0DH78 156 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 FNDC7Q5VTL7 733 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 ZNF600Q6ZNG1 722 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 OR2J1Q9GZK6 312 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 DUSP15Q9H1R2 295 aaPredicted RBP12.76□□□□□ -0.37
RRP1B-201ENST00000340648 TUBA4BQ9H853 241 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 IGKV3D-11A0A0A0MRZ8 115 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 SPNS3Q6ZMD2 512 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 VWCEQ96DN2 955 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 NGBQ9NPG2 151 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
RRP1B-201ENST00000340648 SRXN1Q9BYN0 137 aa12.76□□□□□ -0.37
RRP1B-201ENST00000340648 WDR54Q9H977 334 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms