RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 RSPO1Q2MKA7 263 aaPredicted RBP9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 KCNIP4Q6PIL6 250 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 C1orf210Q8IVY1 113 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 OR1L1Q8NH94 360 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 TMEM9BQ9NQ34 198 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 GLRX2Q9NS18 164 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 DEFA4P12838 97 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 RPS2P15880 293 aaKnown RBP9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 KITLGP21583 273 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 NTF4P34130 210 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 MDH2P40926 338 aaKnown RBP9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 HTD2P86397 168 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 OR8B8Q15620 311 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 DCAF10Q5QP82 559 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 TMEM178AQ8NBL3 297 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 GINS3Q9BRX5 216 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
SEMA4D-201ENST00000339861 LTBP2Q14767 1821 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 BDP1A6H8Y1 2624 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 RRP8O43159 456 aaKnown RBP9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 SPRY3O43610 288 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 OR2H2O95918 312 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 CD5P06127 495 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 GALR1P47211 349 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 PPP1R35Q8TAP8 253 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 SSMEM1Q8WWF3 244 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 TMEM30CPA0ZSE6 113 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 K7ESF4 209 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 WNT9BO14905 357 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 MGST1P10620 155 aaKnown RBP9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 ZNF766Q5HY98 468 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 POM121Q96HA1 1249 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 XKRY2A2RUG3 117 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 OR5B21A6NL26 309 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 SSTP61278 116 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 FOXO1Q12778 655 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 BSXQ3C1V8 233 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 TIPARPQ7Z3E1 657 aaKnown RBP9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 TMEM105Q8N8V8 129 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 MEGF10Q96KG7 1140 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 GSN-AS1Q9NRJ2 163 aa9.47□□□□□ -0.89
SEMA4D-201ENST00000339861 LILRA1O75019 489 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 RAB31Q13636 194 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 FAM78BQ5VT40 261 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 ZNF705AQ6ZN79 300 aaPredicted RBP9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 MPC1Q9Y5U8 109 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 ZNF716A6NP11 495 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 HAND1O96004 215 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 BCL2P10415 239 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 CRYGSP22914 178 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 CFPP27918 469 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 GNG10P50151 68 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 SOX8P57073 446 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 FGFRL1Q8N441 504 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 TMEM171Q8WVE6 324 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 RBKSQ9H477 322 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 TUBG2Q9NRH3 451 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 FOXD3Q9UJU5 478 aaPredicted RBP9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 FUT9Q9Y231 359 aa9.46□□□□□ -0.89
SEMA4D-201ENST00000339861 EML5Q05BV3 1969 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 J3QT63 122 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 ZNF83P51522 516 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 HOXA4Q00056 320 aaPredicted RBP9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 BAGE2Q86Y30 109 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 PINX1Q96BK5 328 aaKnown RBP9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 VSIRQ9H7M9 311 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 LAMA1P25391 3075 aa9.46□□□□□ -0.9
SEMA4D-201ENST00000339861 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 M0R1B8 84 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 CELA3BP08861 270 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 NDUFB7P17568 137 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 LILRB1Q8NHL6 650 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 DTD1Q8TEA8 209 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 C18orf12Q96KH6 178 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 FAM103A1Q9BTL3 118 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 FAM3BP58499 235 aaPredicted RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 RTP5Q14D33 572 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 UBALD2Q8IYN6 164 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 MRPL30Q8TCC3 161 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 Q8WTZ3 238 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 LRRC29Q8WV35 223 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 FOXJ2Q9P0K8 574 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 CACNA1BQ00975 2339 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 H0Y980 276 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 DNPH1O43598 174 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 CD55P08174 381 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 IRF2P14316 349 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 CTSSP25774 331 aa9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 RNPS1Q15287 305 aaKnown RBP9.45□□□□□ -0.9
SEMA4D-201ENST00000339861 RIPPLY2Q5TAB7 128 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms