RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 PARD6AQ9NPB6 346 aa17.34■□□□□ 0.37
RUNX3-202ENST00000338888 EML6Q6ZMW3 1958 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 KIR2DS1A0A191URI9 304 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 C1QTNF9BB2RNN3 333 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 TP53I11O14683 189 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 SELEP16581 610 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 S100GP29377 79 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 KIR2DS4P43632 304 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 KIR2DS1Q14954 304 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 ZDHHC23Q8IYP9 409 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 FADS6Q8N9I5 356 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 ZCCHC14Q8WYQ9 949 aaKnown RBP17.33■□□□□ 0.36
RUNX3-202ENST00000338888 ERRFI1Q9UJM3 462 aaPredicted RBP17.33■□□□□ 0.36
RUNX3-202ENST00000338888 ATP23Q9Y6H3 246 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 ZNF816-ZNF321PA0A0X1KG74 233 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 PAGE4O60829 102 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 SLC25A6P12236 298 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 DMRTA1Q5VZB9 504 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 PCSK4Q6UW60 755 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 OPN3Q9H1Y3 402 aaPredicted RBP17.33■□□□□ 0.36
RUNX3-202ENST00000338888 MANBALQ9NQG1 85 aa17.33■□□□□ 0.36
RUNX3-202ENST00000338888 MRPS11P82912 194 aaKnown RBP17.32■□□□□ 0.36
RUNX3-202ENST00000338888 PSG4Q00888 419 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 SLC38A11Q08AI6 406 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 RAET1LQ5VY80 246 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 SPACA9Q96E40 222 aaPredicted RBP17.32■□□□□ 0.36
RUNX3-202ENST00000338888 LPAR2Q9HBW0 351 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 ZNF407Q9C0G0 2248 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 C20orf204Q6ZNR8 217 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 FGFBP3Q8TAT2 258 aa17.32■□□□□ 0.36
RUNX3-202ENST00000338888 ABCA7Q8IZY2 2146 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 ZNHIT1O43257 154 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 IGKV1-5P01602 117 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 EGR1P18146 543 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 CD38P28907 300 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 BRS3P32247 399 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 GRIFINA4D1Z8 144 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 OR6C6A6NF89 314 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 TOX3O15405 576 aaPredicted RBP17.31■□□□□ 0.36
RUNX3-202ENST00000338888 VAMP5O95183 116 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 CTXN2P0C2S0 81 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 LINC00614P0C842 121 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 ZNF16P17020 682 aaPredicted RBP17.31■□□□□ 0.36
RUNX3-202ENST00000338888 NPPCP23582 126 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 FKBP2P26885 142 aaKnown RBP17.31■□□□□ 0.36
RUNX3-202ENST00000338888 CLDN15P56746 228 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 LCN2P80188 198 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 PMP22Q01453 160 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 OR2W1Q9Y3N9 320 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 PXMP4Q9Y6I8 212 aa17.31■□□□□ 0.36
RUNX3-202ENST00000338888 CFAP54Q96N23 3096 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 TMEM265A0A087WTH1 108 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 LMO7DNF2Z398 122 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 DUX1O43812 170 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 CRYABP02511 175 aaKnown RBP17.3■□□□□ 0.36
RUNX3-202ENST00000338888 NTF4P34130 210 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 TNFSF10P50591 281 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 SRSF7Q16629 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
RUNX3-202ENST00000338888 TCF23Q7RTU1 214 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 OR10G9Q8NGN4 311 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 OR10G7Q8NGN6 311 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 WDYHV1Q96HA8 205 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 ALKBH3Q96Q83 286 aaPredicted RBP17.3■□□□□ 0.36
RUNX3-202ENST00000338888 MIEN1Q9BRT3 115 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 WDFY3Q8IZQ1 3526 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 CTXND1A0A1B0GTU2 59 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 G3V3Y1 287 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 TNFSF11O14788 317 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 DEFA4P12838 97 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 MLF1P58340 268 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 NEIL1Q96FI4 390 aaPredicted RBP17.3■□□□□ 0.36
RUNX3-202ENST00000338888 IMMP2LQ96T52 175 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 TMEM106BQ9NUM4 274 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 PAM16Q9Y3D7 125 aa17.3■□□□□ 0.36
RUNX3-202ENST00000338888 DOCK11Q5JSL3 2073 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 TIAF1O95411 115 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 ZNF324BQ6AW86 544 aaPredicted RBP17.29■□□□□ 0.36
RUNX3-202ENST00000338888 CMTM2Q8TAZ6 248 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 IL1F10Q8WWZ1 152 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 DEFB126Q9BYW3 111 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 PPP1R3CQ9UQK1 317 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 CHCHD2Q9Y6H1 151 aaPredicted RBP17.29■□□□□ 0.36
RUNX3-202ENST00000338888 EDN3P14138 238 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 PPP1CBP62140 327 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 TRIM61Q5EBN2 209 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 CLDN23Q96B33 292 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 CDX2Q99626 313 aaPredicted RBP17.29■□□□□ 0.36
RUNX3-202ENST00000338888 GPR35Q9HC97 309 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 TMEM38BQ9NVV0 291 aa17.29■□□□□ 0.36
RUNX3-202ENST00000338888 VENTXO95231 258 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 BMP5P22003 454 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 OR5I1Q13606 314 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 Q6ZWC4 215 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 WNT5BQ9H1J7 359 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 IGLV3-12A0A075B6K2 115 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A10PA6NDY2 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A18PA6NE21 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A16PA6NEW6 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A20PA6NIJ5 464 aa17.28■□□□□ 0.36
RUNX3-202ENST00000338888 FAM90A8PA6NJQ4 464 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms