RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 CYCSP99999 105 aaKnown RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 TCF23Q7RTU1 214 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 CORO2AQ92828 525 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 RAB1BQ9H0U4 201 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 OR2S2Q9NQN1 319 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 JPT1Q9UK76 154 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 DSCAML1Q8TD84 2053 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 HMSDA8MTL9 139 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 MPTX1A8MV57 137 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 FCN3O75636 299 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 RP2O75695 350 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 S100GP29377 79 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 AP2S1P53680 142 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 FGL1Q08830 312 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 C17orf58Q2M2W7 97 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 FAM53AQ6NSI3 398 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 LGI3Q8N145 548 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 OR8U1Q8NH10 309 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 FAM216AQ8WUB2 273 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 PPP1R1CQ8WVI7 109 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 NINJ1Q92982 152 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 C18orf12Q96KH6 178 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM222Q9H0R3 208 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 METTL8Q9H825 291 aaKnown RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 LINC00574Q9H8X3 128 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 CALYQ9NYX4 217 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 SLC25A10Q9UBX3 287 aaPredicted RBP12.82□□□□□ -0.36
LIMS1-202ENST00000338045 HSPB11Q9Y547 144 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 ZFYVE26Q68DK2 2539 aa12.82□□□□□ -0.36
LIMS1-202ENST00000338045 TRGV10A0A0A0MS01 117 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 C13orf42A0A1B0GVH6 325 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 MEX3AA1L020 520 aaKnown RBP12.81□□□□□ -0.36
LIMS1-202ENST00000338045 HOXB5P09067 269 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 COL8A2P25067 703 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 F2RP25116 425 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 UCP1P25874 307 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
LIMS1-202ENST00000338045 LOXL3P58215 753 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 SRPXP78539 464 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 MRPS11P82912 194 aaKnown RBP12.81□□□□□ -0.36
LIMS1-202ENST00000338045 IL15RAQ13261 267 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 MSMO1Q15800 293 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 LGALSLQ3ZCW2 172 aaPredicted RBP12.81□□□□□ -0.36
LIMS1-202ENST00000338045 LHFPL5Q8TAF8 219 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 OR10C1Q96KK4 312 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 C2orf50Q96LR7 162 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM56Q96MV1 263 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM246Q9BRR3 403 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 RBM7Q9Y580 266 aaKnown RBP12.81□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
LIMS1-202ENST00000338045 KBTBD11-OT1A0A1B0GTJ5 212 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 A6NNC1 897 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 H0Y980 276 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 SNAPC5O75971 98 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 GOSR1O95249 250 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 FGFRL1Q8N441 504 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 DRAM1Q8N682 238 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 ZNF645Q8N7E2 425 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 ZBTB34Q8NCN2 500 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 NEU4Q8WWR8 484 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-202ENST00000338045 GPHA2Q96T91 129 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 CLN8Q9UBY8 286 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 HRNRQ86YZ3 2850 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-202ENST00000338045 ADAM20O43506 726 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 YPEL1O60688 119 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 MEF2CQ06413 473 aaPredicted RBP12.8□□□□□ -0.36
LIMS1-202ENST00000338045 GGNBP1Q5YKI7 109 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 LYPD2Q6UXB3 125 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 LINC00518Q8N0U6 118 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 YPEL2Q96QA6 119 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 AGMATQ9BSE5 352 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 GON7Q9BXV9 100 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 COMMD9Q9P000 198 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 CTSZQ9UBR2 303 aa12.8□□□□□ -0.36
LIMS1-202ENST00000338045 IGHV3-43A0A0B4J1X8 118 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 hADV38S2A0JD32 116 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 ZNF729A6NN14 1252 aaPredicted RBP12.79□□□□□ -0.36
LIMS1-202ENST00000338045 LYNX1G3V0Z9 82 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 TNFSF12O43508 249 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 CDS2O95674 445 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 IFNA21P01568 189 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 IGHV3-43DP0DP04 118 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 LYNX1P0DP58 116 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 SLC25A4P12235 298 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 MORN2Q502X0 79 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 C11orf87Q6NUJ2 197 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 TMEM65Q6PI78 240 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 LYZL2Q7Z4W2 148 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 EDARADDQ8WWZ3 215 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 KCNS2Q9ULS6 477 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 UBE2J1Q9Y385 318 aaPredicted RBP12.79□□□□□ -0.36
LIMS1-202ENST00000338045 LINC00312Q9Y6C7 94 aa12.79□□□□□ -0.36
LIMS1-202ENST00000338045 NDUFB3O43676 98 aa12.78□□□□□ -0.36
LIMS1-202ENST00000338045 IGHV2-70P01814 119 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms