RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 SPATA46Q5T0L3 261 aa11.86□□□□□ -0.51
SF1-202ENST00000334944 CST9LP1Q5W188 147 aa11.86□□□□□ -0.51
SF1-202ENST00000334944 IL22RA2Q969J5 263 aa11.86□□□□□ -0.51
SF1-202ENST00000334944 SPRY4Q9C004 299 aa11.86□□□□□ -0.51
SF1-202ENST00000334944 FGF23Q9GZV9 251 aaPredicted RBP11.86□□□□□ -0.51
SF1-202ENST00000334944 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
SF1-202ENST00000334944 A0A1W2PPQ1 181 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 HPRT1P00492 218 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 ADIRFQ15847 76 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 MEX3BQ6ZN04 569 aaKnown RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 NUFIP2Q7Z417 695 aaKnown RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 IL22RA1Q8N6P7 574 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 SCGB3A2Q96PL1 93 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 TBX15Q96SF7 602 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 KIAA1456Q9P272 454 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 DIDO1Q9BTC0 2240 aaKnown RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 COL27A1Q8IZC6 1860 aaPredicted RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 LINC00614P0C842 121 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 BCL3P20749 454 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 BRS3P32247 399 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■□□□□ 9.5
SF1-202ENST00000334944 IQCJQ1A5X6 159 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 AARDQ4LEZ3 155 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 TMEM164Q5U3C3 297 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 LHFPL2Q6ZUX7 228 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 TMEM171Q8WVE6 324 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 PAM16Q9Y3D7 125 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 M0R296 226 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 AQP7O14520 342 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 CEACAM8P31997 349 aaPredicted RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 PCBD1P61457 104 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 RBX1P62877 108 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 DAZAP2Q15038 168 aaPredicted RBP11.85□□□□□ -0.51
SF1-202ENST00000334944 ABCA11PQ4W5N1 156 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 LCN15Q6UWW0 184 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 ZNF665Q9H7R5 613 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 PRSS50Q9UI38 385 aa11.85□□□□□ -0.51
SF1-202ENST00000334944 ESPL1Q14674 2120 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 ZNF816-ZNF321PA0A0X1KG74 233 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 A0A1B0GU03 582 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 NUPR1O60356 82 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 MT-CO3P00414 261 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 ZNF728P0DKX0 622 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 CD82P27701 267 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
SF1-202ENST00000334944 RIPPLY2Q5TAB7 128 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 Q6ZSR3 168 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 ZNF573Q86YE8 665 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 ZNF100Q8IYN0 542 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 CLDND2Q8NHS1 167 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 TMEM210A6NLX4 147 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 HSPA12AO43301 675 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 PMP22Q01453 160 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 HES3Q5TGS1 186 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 TMEM42Q69YG0 159 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.84□□□□□ -0.51
SF1-202ENST00000334944 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
SF1-202ENST00000334944 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
SF1-202ENST00000334944 ZNF552Q9H707 407 aaPredicted RBP11.84□□□□□ -0.51
SF1-202ENST00000334944 IGSF23A1L1A6 192 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 SYNGR4O95473 234 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 FUT6P51993 359 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 PRDX4Q13162 271 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 NECAP2Q9NVZ3 263 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 B4GALT7Q9UBV7 327 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 MED12LQ86YW9 2145 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 WISP2O76076 250 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 MEOX1P50221 254 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 MALLQ13021 153 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 OR8B8Q15620 311 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 MRPL21Q7Z2W9 205 aaKnown RBP11.83□□□□□ -0.52
SF1-202ENST00000334944 CMTM1Q8IZ96 169 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 CACNA1DQ01668 2161 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 CYB5R3P00387 301 aaPredicted RBP11.83□□□□□ -0.52
SF1-202ENST00000334944 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
SF1-202ENST00000334944 GAGE1Q13065 139 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 TOMM20LQ6UXN7 152 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 APH1AQ96BI3 265 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
SF1-202ENST00000334944 GTF3C1Q12789 2109 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 CRYM-AS1A6NIL9 109 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 SYNGR1O43759 233 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
SF1-202ENST00000334944 AADACP22760 399 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 KRTAP27-1Q3LI81 207 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 ZNF506Q5JVG8 444 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
SF1-202ENST00000334944 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms