RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 C4orf33Q8N1A6 199 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 Q8N814 137 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 FNDC5Q8NAU1 212 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 OR4D5Q8NGN0 318 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CD300LFQ8TDQ1 290 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GNPDA2Q8TDQ7 276 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GPR148Q8TDV2 347 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 FBXO17Q96EF6 278 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PELI1Q96FA3 418 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM19Q96HH6 336 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ADTRPQ96IZ2 230 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 YPEL2Q96QA6 119 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 F2RL3Q96RI0 385 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CLCC1Q96S66 551 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 KCNJ15Q99712 375 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ANKRD60Q9BZ19 345 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PRRG3Q9BZD7 231 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ALG9Q9H6U8 611 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SCPEP1Q9HB40 452 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 OR52A1Q9UKL2 312 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ANAPC10Q9UM13 185 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SNX24Q9Y343 169 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ENPP4Q9Y6X5 453 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 X6R8D5 127 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TRAV9-2A0A087WT02 112 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 A0A0A6YYH2 397 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MYOCOSA0A1B0GUC4 107 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RPS10-NUDT3A0A1W2PQS6 291 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 A6NJ64 397 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF726A6NNF4 738 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 NUDT19A8MXV4 375 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 IBA57-AS1B1ANH7 110 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MCIDASD6RGH6 385 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 KRTAP4-16G5E9R7 235 aaPredicted RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SLC16A6O15403 523 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SELENOFO60613 162 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 LYZL6O75951 148 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TK1P04183 234 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 LYNP07948 512 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00614P0C842 121 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GSTT2P0CG29 244 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GSTT2BP0CG30 244 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 EGR2P11161 476 aaPredicted RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GFAPP14136 432 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF3P17036 446 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RCC1P18754 421 aaPredicted RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 IL12AP29459 219 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 S100A3P33764 101 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 HAAOP46952 286 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 STX1BP61266 288 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 VSNL1P62760 191 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 DYNLT1P63172 113 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 HBA1P69905 142 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SIRPAP78324 504 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MRPS15P82914 257 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CDK5Q00535 292 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF91Q05481 1191 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ST3GAL3Q11203 375 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ARFRP1Q13795 201 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 P2RY14Q15391 338 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PRSS53Q2L4Q9 553 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MPV17LQ2QL34 196 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 HIKESHIQ53FT3 197 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 LINC01556Q5JQF7 62 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 PABPC1L2AQ5JQF8 200 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 HACD4Q5VWC8 232 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM200BQ69YZ2 307 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SLC18B1Q6NT16 456 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SHFQ7M4L6 423 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SSX7Q7RTT5 188 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CEACAM19Q7Z692 300 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SLC35E3Q7Z769 313 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MOGAT3Q86VF5 341 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CACUL1Q86Y37 369 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 NUDCD3Q8IVD9 361 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MICU2Q8IYU8 434 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF709Q8N972 641 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 BOLLQ8N9W6 283 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 OR13F1Q8NGS4 319 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 GRPEL2Q8TAA5 225 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 C11orf45Q8TAV5 145 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 RNF141Q8WVD5 230 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 NRG4Q8WWG1 115 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 VPS33AQ96AX1 596 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF414Q96IQ9 312 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 IL17FQ96PD4 163 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 NIPSNAP1Q9BPW8 284 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MICU1Q9BPX6 476 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 MACROD1Q9BQ69 325 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TM2D2Q9BX73 214 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 DPY30Q9C005 99 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 VCXQ9H320 206 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TUBA4BQ9H853 241 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 C19orf12Q9NSK7 152 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 SNTG1Q9NSN8 517 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 TAS2R1Q9NYW7 299 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 CNOT2Q9NZN8 540 aaKnown RBP1.04□□□□□ -2.24
LINC00643-201ENST00000334389 COX16Q9P0S2 106 aa1.04□□□□□ -2.24
LINC00643-201ENST00000334389 WARS2Q9UGM6 360 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms