RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 DUOX1Q9NRD9 1551 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 GFYI3L273 518 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 PRDX2P32119 198 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 SEC61GP60059 68 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 PPIAP62937 165 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 C17orf67Q0P5P2 114 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 RBMY1FQ15415 496 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF324BQ6AW86 544 aaPredicted RBP5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 CD200R1LQ6Q8B3 271 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 BCDIN3DQ7Z5W3 292 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 SECTM1Q8WVN6 248 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 MLST8Q9BVC4 326 aa5.35□□□□□ -1.55
CDC42BPA-201ENST00000334218 CXCL12P48061 93 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CACNG7P62955 275 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRA2AQ13595 282 aaKnown RBP eCLIP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CEACAM7Q14002 265 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 C15orf39Q6ZRI6 1047 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 S1PR5Q9H228 398 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 MED20Q9H944 212 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 INIPQ9NRY2 104 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 BEX4Q9NWD9 120 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 MRGPREQ86SM8 312 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 B5MCH6 92 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 PVRP15151 417 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 RGRP47804 291 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TAL2Q16559 108 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 LRRC10Q5BKY1 277 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 SLC25A53Q5H9E4 307 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR52P1PQ8NH57 321 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 SH3BGRL3Q9H299 93 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 PGPA6NDG6 321 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF688P0C7X2 276 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CEACAM3P40198 252 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CLDN17P56750 224 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 IFITM3Q01628 133 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 COA6Q5JTJ3 125 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEFF1Q8IYR6 380 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF524Q96C55 264 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 SMIM19Q96E16 107 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 GALNT14Q96FL9 552 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CICQ96RK0 1608 aaPredicted RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 H3BUT2 72 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 HMGN2P05204 90 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 KIAA1644Q3SXP7 199 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 FDCSPQ8NFU4 85 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 MRGPRFQ96AM1 343 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 UBE2WQ96B02 151 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CHCHD1Q96BP2 118 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 ZNF355PQ9NSJ1 428 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 RPUSD1Q9UJJ7 312 aaKnown RBP5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TRBV7-9A0A0J9YWB2 115 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 CXorf51AA0A1B0GTR3 108 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 C17orf51A8MQB3 221 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 DEFA4P12838 97 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 MYF5P13349 255 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 AGAP20933 346 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TREML2Q5T2D2 321 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 ISCA2Q86U28 154 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 OR4C3Q8NH37 302 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 EDARADDQ8WWZ3 215 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 TLNRD1Q9H1K6 362 aa5.34□□□□□ -1.55
CDC42BPA-201ENST00000334218 VDAC1P21796 283 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 MIPP30301 263 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 UBE2AP49459 152 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 HTR6P50406 440 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM50BP56557 158 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 MRPS36P82909 103 aaKnown RBP5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 TOX2Q96NM4 488 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 SIGLEC7Q9Y286 467 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 RHBDD3Q9Y3P4 386 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLC25A15Q9Y619 301 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 SBK3P0C264 359 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 PXNP49023 591 aaPredicted RBP5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 UBE2BP63146 152 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 RUNX3Q13761 415 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 C8orf44Q96CB5 159 aa5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 INSM2Q96T92 566 aaPredicted RBP5.34□□□□□ -1.56
CDC42BPA-201ENST00000334218 NOTCH3Q9UM47 2321 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 MPC2O95563 127 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 B4GALT1P15291 398 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 HERV-K104P63124 156 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ACER2Q5QJU3 275 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 OR4F17Q8NGA8 305 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 RMI2Q96E14 147 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 UBL5Q9BZL1 73 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 NXT1Q9UKK6 140 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 UBE2E1P51965 193 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 AAED1Q7RTV5 226 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 NRG4Q8WWG1 115 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ST6GALNAC6Q969X2 333 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRGV10A0A0A0MS01 117 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ANKRD63C9JTQ0 380 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SPINT2O43291 252 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 SP1P08047 785 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 RPL34P49207 117 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 RUNX1Q01196 453 aa5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ELAVL1Q15717 326 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZNF77Q15935 545 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms