RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TMEM267Q0VDI3 215 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 DHRS7BQ6IAN0 325 aaPredicted RBP12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 LIN7CQ9NUP9 197 aaKnown RBP12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 ATMQ13315 3056 aa12.49□□□□□ -0.41
CLCNKA-201ENST00000331433 GPR37O15354 613 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 WNT2P09544 360 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MSMPQ1L6U9 139 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 ETV3LQ6ZN32 361 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 GALMQ96C23 342 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 TM4SF5O14894 197 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 HBZP02008 142 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 IAPPP10997 89 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 SLC25A6P12236 298 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 IL2RGP31785 369 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 P2RY6Q15077 328 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 C5orf30Q96GV9 206 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 OR2D2Q9H210 308 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 SLC25A15Q9Y619 301 aa12.48□□□□□ -0.41
CLCNKA-201ENST00000331433 ANKRD11Q6UB99 2663 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 K7EM74 188 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF83P51522 516 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 COL10A1Q03692 680 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 HFEQ30201 348 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 MBNL2Q5VZF2 373 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 LRP11Q86VZ4 500 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 COMMD1Q8N668 190 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 LSM10Q969L4 123 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 DUSP13Q9UII6 198 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 TXNL1O43396 289 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 SSTR5P35346 364 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 GLIPR1P48060 266 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 CCL20P78556 96 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 SLC35E4Q6ICL7 350 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 STX12Q86Y82 276 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 FAM215AQ9Y5M1 114 aa12.47□□□□□ -0.41
CLCNKA-201ENST00000331433 BSNQ9UPA5 3926 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 OOEPA6NGQ2 149 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 RAMP3O60896 148 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 AKR1C3P42330 323 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 RPL23AP62750 156 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 PEA15Q15121 130 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 ZNF474Q6S9Z5 364 aaPredicted RBP12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 BEND4Q6ZU67 534 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 LRRC29Q8WV35 223 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 RAB40CQ96S21 281 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 ATP5SQ99766 215 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 DCHS1Q96JQ0 3298 aa12.46□□□□□ -0.41
CLCNKA-201ENST00000331433 SYNGR2O43760 224 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 SULT1A1P50225 295 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 SMIM21Q3B7S5 101 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 KRBOX4Q5JUW0 171 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 ZNF645Q8N7E2 425 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 OR13A1Q8NGR1 328 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 RFESDQ8TAC1 157 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 S100PBPQ96BU1 408 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 KPTNQ9Y664 436 aa12.46□□□□□ -0.42
CLCNKA-201ENST00000331433 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 PLCE1Q9P212 2302 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 PIGBOS1A0A0B4J2F0 54 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 M0R1B8 84 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 H2AFB1P0C5Y9 115 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 EGR1P18146 543 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 TUBG1P23258 451 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 FAM122CQ6P4D5 195 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 IGFL3Q6UXB1 125 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 FGFRL1Q8N441 504 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 CD177Q8N6Q3 437 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 RARRES2Q99969 163 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 TUBG2Q9NRH3 451 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 SMG1Q96Q15 3661 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 DMXL2Q8TDJ6 3036 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 METTL15P1P0C7V9 234 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 BTNL3Q6UXE8 466 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 NDRG3Q9UGV2 375 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 WSB1Q9Y6I7 421 aa12.45□□□□□ -0.42
CLCNKA-201ENST00000331433 ACACAQ13085 2346 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 H7C2Y5 167 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 CEACAM1P13688 526 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 CTRB1P17538 263 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 CD200P41217 278 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 ARL16Q0P5N6 197 aa12.44□□□□□ -0.42
CLCNKA-201ENST00000331433 ZNF816Q0VGE8 651 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms