RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 SLC22A20A6NK97 555 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 NAPSAO96009 420 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 NMSQ5H8A3 153 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 PYGO2Q9BRQ0 406 aa17.63■□□□□ 0.41
CMTM4-201ENST00000330687 TRBV11-1A0A0K0K1C0 115 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 MDFIC2A0A1B0GVS7 189 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 A0A1W2PQD3 144 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 CLEC18AA5D8T8 446 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 CD38P28907 300 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 OTX2P32243 289 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 AMTP48728 403 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 PDLIM4P50479 330 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 CLEC18CQ8NCF0 446 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 SSC4DQ8WTU2 575 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 NEIL1Q96FI4 390 aaPredicted RBP17.62■□□□□ 0.41
CMTM4-201ENST00000330687 C11orf1Q9H5F2 150 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 TRAV1-1A0A0B4J248 108 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 IER3P46695 156 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 CNN3Q15417 329 aaKnown RBP17.62■□□□□ 0.41
CMTM4-201ENST00000330687 PHYHD1Q5SRE7 291 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 SLC25A47Q6Q0C1 308 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 LMX1AQ8TE12 382 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 ST8SIA1Q92185 356 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 ANAPC16Q96DE5 110 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 MRGPRX1Q96LB2 322 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 SLC17A3O00476 420 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 FCN1O00602 326 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 RBX1P62877 108 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 SHBQ15464 509 aa17.62■□□□□ 0.41
CMTM4-201ENST00000330687 ALKBH7Q9BT30 221 aaPredicted RBP17.62■□□□□ 0.41
CMTM4-201ENST00000330687 SPTBN5Q9NRC6 3674 aaKnown RBP17.61■□□□□ 0.41
CMTM4-201ENST00000330687 IGHV3-64DA0A0J9YX35 117 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 MYF5P13349 255 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 PARM1Q6UWI2 310 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF611Q8N823 705 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 TAF15Q92804 592 aaKnown RBP eCLIP17.61■□□□□ 0.41
CMTM4-201ENST00000330687 WDYHV1Q96HA8 205 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 SPOCK3Q9BQ16 436 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 ULBP2Q9BZM5 246 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 NPIPA2E9PIF3 369 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 NPIPA3F8WFD2 350 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 CCL1P22362 96 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 KIR2DL1P43626 348 aaPredicted RBP17.61■□□□□ 0.41
CMTM4-201ENST00000330687 TPTE2P1Q5T6R2 138 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 ACSM6Q6P461 480 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 TMEM56Q96MV1 263 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 OR6C1Q96RD1 312 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 TMEM56-RWDD3S4R434 201 aa17.61■□□□□ 0.41
CMTM4-201ENST00000330687 ATP5G3P48201 142 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 DEFB133Q30KQ1 61 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 FBXW9Q5XUX1 488 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 OR5D13Q8NGL4 314 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 MBD3L1Q8WWY6 194 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 RNF115Q9Y4L5 304 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 ADAMTS9Q9P2N4 1935 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 A0A1W2PQF6 199 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 TUSC2O75896 110 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF114Q8NC26 417 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 UCN2Q96RP3 112 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF703Q9H7S9 590 aaPredicted RBP17.6■□□□□ 0.41
CMTM4-201ENST00000330687 FRYQ5TBA9 3013 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 PGLYRP1O75594 196 aaPredicted RBP17.6■□□□□ 0.41
CMTM4-201ENST00000330687 OR10G3Q8NGC4 313 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF501Q96CX3 271 aaPredicted RBP17.6■□□□□ 0.41
CMTM4-201ENST00000330687 RAB40CQ96S21 281 aa17.6■□□□□ 0.41
CMTM4-201ENST00000330687 ABCA7Q8IZY2 2146 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 FRMD6-AS1P0C7T7 363 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 GABRG3Q99928 467 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 GPR27Q9NS67 375 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 WIPI2Q9Y4P8 454 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 IGHV3-9P01782 118 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 HS3ST6Q96QI5 342 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 PARD6GQ9BYG4 376 aaPredicted RBP17.59■□□□□ 0.41
CMTM4-201ENST00000330687 WDR61Q9GZS3 305 aaKnown RBP17.59■□□□□ 0.41
CMTM4-201ENST00000330687 RANP62826 216 aaKnown RBP17.59■□□□□ 0.41
CMTM4-201ENST00000330687 HAPLN4Q86UW8 402 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 ZNF586Q9NXT0 402 aa17.59■□□□□ 0.41
CMTM4-201ENST00000330687 LOC102725191A0A1B0GVB3 256 aa17.58■□□□□ 0.41
CMTM4-201ENST00000330687 LNP1A1A4G5 178 aa17.58■□□□□ 0.41
CMTM4-201ENST00000330687 BLACEA4D250 179 aa17.58■□□□□ 0.41
CMTM4-201ENST00000330687 CRYABP02511 175 aaKnown RBP17.58■□□□□ 0.41
CMTM4-201ENST00000330687 C9orf135Q5VTT2 229 aa17.58■□□□□ 0.41
CMTM4-201ENST00000330687 LAMTOR2Q9Y2Q5 125 aa17.58■□□□□ 0.41
CMTM4-201ENST00000330687 PCDH15Q96QU1 1955 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 F6UZH7 168 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 B4GALT1P15291 398 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 GCSAMLQ5JQS6 135 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 FAM19A2Q8N3H0 131 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 PINX1Q96BK5 328 aaKnown RBP17.58■□□□□ 0.4
CMTM4-201ENST00000330687 USF3Q68DE3 2245 aa17.58■□□□□ 0.4
CMTM4-201ENST00000330687 TRAV38-1A0A0B4J264 116 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 GDF9O60383 454 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 F2RP25116 425 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 SRP14P37108 136 aaKnown RBP17.57■□□□□ 0.4
CMTM4-201ENST00000330687 RSPO1Q2MKA7 263 aaPredicted RBP17.57■□□□□ 0.4
CMTM4-201ENST00000330687 LYG1Q8N1E2 194 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 ADPRHL1Q8NDY3 354 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 SPSB1Q96BD6 273 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 C20orf144Q9BQM9 153 aa17.57■□□□□ 0.4
CMTM4-201ENST00000330687 MRPL18Q9H0U6 180 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms