RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 GAL3ST2Q9H3Q3 398 aa7.92□□□□□ -1.14
TMEM39A-201ENST00000319172 Q9N2K0 584 aa7.92□□□□□ -1.14
TMEM39A-201ENST00000319172 RALYQ9UKM9 306 aaKnown RBP7.92□□□□□ -1.14
TMEM39A-201ENST00000319172 LAMP3Q9UQV4 416 aa7.92□□□□□ -1.14
TMEM39A-201ENST00000319172 CEP192Q8TEP8 1941 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 CDH23Q9H251 3354 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 GATCO43716 136 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 SRSF10O75494 262 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 OTX1P32242 354 aaPredicted RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 TESK1Q15569 626 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 RPL7L1Q6DKI1 246 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 OR2C3Q8N628 320 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 DHRS9Q9BPW9 319 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 SPRY4Q9C004 299 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 A1L4Q6 167 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 HMSDA8MTL9 139 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 ALX3O95076 343 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 TMEM33P57088 247 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 PEA15Q15121 130 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 AVPI1Q5T686 147 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 STUMQ69YW2 141 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 S100A7AQ86SG5 101 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 OR5C1Q8NGR4 320 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 LEAP2Q969E1 77 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 ZNF251Q9BRH9 671 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 SLC25A10Q9UBX3 287 aaPredicted RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 ANKRD11Q6UB99 2663 aaPredicted RBP7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 IGHV1-18A0A0C4DH31 117 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 ZFP92A6NM28 416 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 BTN1A1Q13410 526 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 RPS10P5Q9NQ39 176 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 TUBG2Q9NRH3 451 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 TNFRSF19Q9NS68 423 aa7.91□□□□□ -1.14
TMEM39A-201ENST00000319172 F8VVB4 439 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 F8VWA3 439 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 CHST1O43916 411 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 CRYBA1P05813 215 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 SNRNP70P08621 437 aaKnown RBP7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 SSTR5P35346 364 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 REG1BP48304 166 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 TOR2AQ5JU69 321 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 FAM166AQ6J272 317 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 DOLPP1Q86YN1 238 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 RNF138Q8WVD3 245 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 RNF115Q9Y4L5 304 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 PUS1Q9Y606 427 aaKnown RBP eCLIP7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 NCOA6Q14686 2063 aaPredicted RBP7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 TRANK1O15050 2925 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 IGKV1D-8A0A087WSZ0 117 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 ODAMA1E959 279 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 G6PCP35575 357 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 TLE4Q04727 773 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 IZUMO4Q1ZYL8 232 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 C2orf68Q2NKX9 166 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 LRP11Q86VZ4 500 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 MOB3AQ96BX8 217 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 MEGF10Q96KG7 1140 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 DCTN5Q9BTE1 182 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 PLSCR4Q9NRQ2 329 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 SERTAD4Q9NUC0 356 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 ZNF581Q9P0T4 197 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 MSRB2Q9Y3D2 182 aa7.9□□□□□ -1.14
TMEM39A-201ENST00000319172 K7EM74 188 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 CLEC3BP05452 202 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 CXCL2P19875 107 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 F2RP25116 425 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 RAB7AP51149 207 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 HIST1H3AP68431 136 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 HIST2H3PS2Q5TEC6 136 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 HIST2H3AQ71DI3 136 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 RPEQ96AT9 228 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 OR10C1Q96KK4 312 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 NMES1Q9C002 83 aa7.9□□□□□ -1.15
TMEM39A-201ENST00000319172 S100A2P29034 98 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 OR2B8PP59922 312 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 FOXL2NBQ6ZUU3 175 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 ELOVL5Q9NYP7 299 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 UBE2L5PA0A1B0GUS4 154 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 C17orf112F2Z3M2 114 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 ZP1P60852 638 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 RHEBQ15382 184 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 UNKLQ9H9P5 680 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 CLN8Q9UBY8 286 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 ZDHHC8Q9ULC8 765 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 IQCF6A8MYZ5 107 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 RAB4AP20338 218 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 TAS2R30P59541 319 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 HAGHQ16775 308 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 OR5B12Q96R08 314 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 OR51I2Q9H344 312 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 SLC2A8Q9NY64 477 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 OR5AC2Q9NZP5 309 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 FBLN5Q9UBX5 448 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 ADH4P08319 380 aa7.89□□□□□ -1.15
TMEM39A-201ENST00000319172 OR13C7P0DN81 318 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms