RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 HSPA12AO43301 675 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 TXNL1O43396 289 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 MRPS14O60783 128 aaKnown RBP12.76□□□□□ -0.37
HDDC2-201ENST00000318787 MOSP00540 346 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 PF4V1P10720 104 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 HTD2P86397 168 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 ZNF554Q86TJ5 538 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 ZNF329Q86UD4 541 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 IZUMO1Q8IYV9 350 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 FCGR1BQ92637 280 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 ST6GALNAC6Q969X2 333 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 CMSS1Q9BQ75 279 aaKnown RBP12.76□□□□□ -0.37
HDDC2-201ENST00000318787 PECRQ9BY49 303 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 LRRC42Q9Y546 428 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 PLXNB1O43157 2135 aa12.76□□□□□ -0.37
HDDC2-201ENST00000318787 TRAV1-2A0A0B4J238 106 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 FGF16O43320 207 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 NAPSAO96009 420 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 CD37P11049 281 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 RANBP1P43487 201 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 OR3A3P47888 321 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 UBE2UQ5VVX9 321 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 Q6ZPA2 131 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 MOB1BQ7L9L4 216 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 OR4F17Q8NGA8 305 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 OR4F4Q96R69 305 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 C12orf4Q9NQ89 552 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 RAB22AQ9UL26 194 aa12.75□□□□□ -0.37
HDDC2-201ENST00000318787 IFITM5A6NNB3 132 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 YPEL1O60688 119 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 OPN1MWP04001 364 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 OPN1MW2P0DN77 364 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 OPN1MW3P0DN78 364 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 CD1BP29016 333 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 TMEM50BP56557 158 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 HLA-DRB3P79483 266 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 NEDD8Q15843 81 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 CD200R1LQ6Q8B3 271 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 FOXRED2Q8IWF2 684 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 FAM89BQ8N5H3 189 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-201ENST00000318787 YPEL2Q96QA6 119 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 MRPL20Q9BYC9 149 aaKnown RBP12.74□□□□□ -0.37
HDDC2-201ENST00000318787 YTHDF1Q9BYJ9 559 aaKnown RBP12.74□□□□□ -0.37
HDDC2-201ENST00000318787 RIMS4Q9H426 269 aaPredicted RBP12.74□□□□□ -0.37
HDDC2-201ENST00000318787 STUB1Q9UNE7 303 aa12.74□□□□□ -0.37
HDDC2-201ENST00000318787 SAA2-SAA4A0A096LPE2 208 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 PF4P02776 101 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 CD3GP09693 182 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 SAA2P0DJI9 122 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-201ENST00000318787 SLC2A2P11168 524 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-201ENST00000318787 GADD45AP24522 165 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 ZNF137PP52743 207 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 LSAMPQ13449 338 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 MOGAT2Q3SYC2 334 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 PLAC9Q5JTB6 97 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 ZNF773Q6PK81 442 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 RAB3CQ96E17 227 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 TXNL4BQ9NX01 149 aaKnown RBP12.73□□□□□ -0.37
HDDC2-201ENST00000318787 OR1A1Q9P1Q5 309 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 SSR3Q9UNL2 185 aa12.73□□□□□ -0.37
HDDC2-201ENST00000318787 TSSC4Q9Y5U2 329 aaPredicted RBP12.73□□□□□ -0.37
HDDC2-201ENST00000318787 ADARB2-AS1A8MUL3 147 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 G3V4G9 280 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 LANCL1O43813 399 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 SCTP09683 121 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 GNB3P16520 340 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 CEACAM6P40199 344 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 F2RL1P55085 397 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 CD83Q01151 205 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 EBI3Q14213 229 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 MMDQ15546 238 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 STEAP3Q658P3 488 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 ZNF880Q6PDB4 577 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 ODF3L1Q8IXM7 274 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 Q8N9W7 124 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 ABHD14BQ96IU4 210 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 S1PR3Q99500 378 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 CHCHD6Q9BRQ6 235 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 PARP12Q9H0J9 701 aaKnown RBP12.72□□□□□ -0.37
HDDC2-201ENST00000318787 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 OR51E2Q9H255 320 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 Q9N2K0 584 aa12.72□□□□□ -0.37
HDDC2-201ENST00000318787 NOTCH1P46531 2555 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 LINC01548A6NM66 108 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.37
HDDC2-201ENST00000318787 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 ZBTB25P24278 435 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 SLC35B1P78383 322 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 MXD1Q05195 221 aa12.71□□□□□ -0.37
HDDC2-201ENST00000318787 RPL39P5Q59GN2 51 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms