RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 OR8U1Q8NH10 309 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 RFESDQ8TAC1 157 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 MRPL24Q96A35 216 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 BEX4Q9NWD9 120 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 SFT2D2O95562 160 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OPN1MWP04001 364 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OPN1MW2P0DN77 364 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OPN1MW3P0DN78 364 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 HTR2BP41595 481 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 SOX7Q9BT81 388 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 IDI2-AS1Q9NZ38 188 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 TP53BP1Q12888 1972 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM221AA4D161 298 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF729A6NN14 1252 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 SRD5A1P18405 259 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 MARCH1Q8TCQ1 289 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 FAM212BQ9NTI7 297 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 B4DSR2 109 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 TAAR5O14804 337 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2F2O95006 317 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 IFITM3Q01628 133 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2F1Q13607 317 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 OR9G1Q8NH87 305 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 PLEKHA2Q9HB19 425 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 PARP11Q9NR21 331 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 AK3Q9UIJ7 227 aa7.29□□□□□ -1.24
PDLIM5-201ENST00000317968 WNT9BO14905 357 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2B8PP59922 312 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PEA15Q15121 130 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM268Q5VZI3 342 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PDZD9Q8IXQ8 264 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 C3orf56Q8N813 242 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 OR2T10Q8NGZ9 312 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 LYZL4Q96KX0 146 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 C2orf50Q96LR7 162 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 OR51I2Q9H344 312 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PSENENQ9NZ42 101 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 WASHC3Q9Y3C0 194 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PYCARD-AS1I3L0S3 204 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 CLN5O75503 358 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PSG7Q13046 419 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 CSAG2Q9Y5P2 127 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 UTRNP46939 3433 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 FER1L5A0AVI2 2057 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A0A6YYJ9 748 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 KRASP01116 189 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 FCGR3AP08637 254 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 NAT1P18440 290 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 LPAR6P43657 344 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 VDAC2P45880 294 aaPredicted RBP7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PXDC1Q5TGL8 231 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 GGNBP1Q5YKI7 109 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 NR2C2APQ86WQ0 139 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 SUMF2Q8NBJ7 301 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 SEC22CQ9BRL7 303 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 IGKV1-9A0A0C4DH69 117 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 SSX5O60225 188 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 PSMB3P49720 205 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 UBA52P62987 128 aaKnown RBP7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 SMAGPQ0VAQ4 97 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF407Q9C0G0 2248 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 ZNF319Q9P2F9 582 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 LMX1BO60663 402 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 GATA3P23771 443 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 UNC119Q13432 240 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 SLC35E4Q6ICL7 350 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 NAA60Q9H7X0 242 aa7.28□□□□□ -1.24
PDLIM5-201ENST00000317968 IGHV3-43A0A0B4J1X8 118 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 A0A1B0GVG6 124 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 TNFSF12O43508 249 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 IGHV3-43DP0DP04 118 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 HIST1H1BP16401 226 aaKnown RBP7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 OR5T1Q8NG75 326 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 OR1L1Q8NH94 360 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 TMEM186Q96B77 213 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 GNPNAT1Q96EK6 184 aaPredicted RBP7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 HARBI1Q96MB7 349 aa7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 SDHCQ99643 169 aaPredicted RBP7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 ACTR3CQ9C0K3 210 aaPredicted RBP7.27□□□□□ -1.24
PDLIM5-201ENST00000317968 MED12Q93074 2177 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ATP6V1G1O75348 118 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF205O95201 554 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 KRTAP27-1Q3LI81 207 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 SPANXN5Q5MJ07 72 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF546Q86UE3 836 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 LHX4Q969G2 390 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 C14orf79Q96F83 325 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 ABHD14AQ9BUJ0 271 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 WDR13Q9H1Z4 485 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 TAS2R3Q9NYW6 316 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 KCNK7Q9Y2U2 307 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 A0A0G2JLM5 398 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 CORTO00230 105 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 TNFSF13O75888 250 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 IGLV1-44P01699 117 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 METTL15P1P0C7V9 234 aa7.27□□□□□ -1.25
PDLIM5-201ENST00000317968 PGA5P0DJD9 388 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms