RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 ZNF506Q5JVG8 444 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 SLC35E3Q7Z769 313 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM178AQ8NBL3 297 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 OR5D13Q8NGL4 314 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 OR4F5Q8NH21 305 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 SDSLQ96GA7 329 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 OR4F4Q96R69 305 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 PRDM14Q9GZV8 571 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 SIRT7Q9NRC8 400 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 DEPPQ9NTK1 212 aa8.98□□□□□ -0.97
COL3A1-202ENST00000317840 KLF13Q9Y2Y9 288 aaPredicted RBP8.98□□□□□ -0.97
COL3A1-202ENST00000317840 PPP5D1E7EU14 171 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 ZNF737O75373 536 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 PGA5P0DJD9 388 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 CD59P13987 128 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BOP23527 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BBP33778 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 GLIPR1P48060 266 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BDP58876 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BCP62807 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SRSF6Q13247 344 aaKnown RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST2H2BEQ16778 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BHQ93079 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BNQ99877 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 HIST1H2BMQ99879 126 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 CELSR3Q9NYQ7 3312 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 A0A0G2JRQ6 117 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 A0A0U1RQK1 487 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 A0A1B0GU03 582 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 OR5H1A6NKK0 313 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 ACP1P24666 158 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 PSMB3P49720 205 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SOX8P57073 446 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SLC38A11Q08AI6 406 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 FOXC1Q12948 553 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SPINK9Q5DT21 86 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 NMSQ5H8A3 153 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 WDR25Q64LD2 544 aaPredicted RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 ASCL4Q6XD76 172 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 CXorf67Q86X51 503 aaPredicted RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 H1FOOQ8IZA3 346 aaPredicted RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 LINC00469Q8N7U9 141 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 OR2M7Q8NG81 312 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 C1QTNF5Q9BXJ0 243 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 VSIRQ9H7M9 311 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 CDH20Q9HBT6 801 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 LIN7CQ9NUP9 197 aaKnown RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 WDFY4Q6ZS81 3184 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 MDH2P40926 338 aaKnown RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 ERVS71-1P61550 626 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 OR8G1Q15617 311 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 OR5A2Q8NGI9 324 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SCRT1Q9BWW7 348 aa8.97□□□□□ -0.97
COL3A1-202ENST00000317840 SEBOXQ9HB31 216 aaPredicted RBP8.97□□□□□ -0.97
COL3A1-202ENST00000317840 TRGV5A0A0B4J1U4 118 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 DUXBA0A1W2PPF3 345 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 RHBDL1O75783 438 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 CST9LP1Q5W188 147 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 TMEM37Q8WXS4 190 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 FRZBQ92765 325 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 PLPPR2Q96GM1 343 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 PACRGQ96M98 296 aaPredicted RBP8.96□□□□□ -0.97
COL3A1-202ENST00000317840 OBP2BQ9NPH6 170 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 ARHGAP21Q5T5U3 1957 aa8.96□□□□□ -0.97
COL3A1-202ENST00000317840 IFNA10P01566 189 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 ARR3P36575 388 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 PMELP40967 661 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
COL3A1-202ENST00000317840 Q6ZPA2 131 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 RCC1LQ96I51 464 aaKnown RBP8.96□□□□□ -0.98
COL3A1-202ENST00000317840 OR4C12Q96R67 309 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 RBKSQ9H477 322 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 DLL3Q9NYJ7 618 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 CRIM1Q9NZV1 1036 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 DMRT1Q9Y5R6 373 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 IGKV1-6A0A0C4DH72 117 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 PINLYPA6NC86 204 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 CYTIPO60759 359 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 GABRA2P47869 451 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 UCP2P55851 309 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 B3GALT5-AS1P59052 145 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 MRPL49Q13405 166 aaKnown RBP8.96□□□□□ -0.98
COL3A1-202ENST00000317840 MSMO1Q15800 293 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 ZNF66Q6ZN08 573 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 C20orf204Q6ZNR8 217 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 TMEM251Q8N6I4 163 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 MALSU1Q96EH3 234 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 TAAR3PQ9P1P4 343 aa8.96□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A10PA6NDY2 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A18PA6NE21 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A16PA6NEW6 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A20PA6NIJ5 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A8PA6NJQ4 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A7PA6NKC0 464 aa8.95□□□□□ -0.98
COL3A1-202ENST00000317840 FAM90A22PA8MWA6 464 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms