RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 LOC101059948A0A1B0GTJ6 334 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 TIAF1O95411 115 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 CD82P27701 267 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 UCP2P55851 309 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 KHDC1LQ5JSQ8 128 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 OR1B1Q8NGR6 318 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 TUBD1Q9UJT1 453 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 IGKV3D-11A0A0A0MRZ8 115 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 OR2H2O95918 312 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 CD8AP01732 235 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 PRDX2P32119 198 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 TEPPQ6URK8 271 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 ABHD14BQ96IU4 210 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 SRXN1Q9BYN0 137 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 WIPI2Q9Y4P8 454 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 FAM157CP0CG43 387 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 CCKARP32238 428 aa11.9□□□□□ -0.5
SPAST-201ENST00000315285 PTBP3O95758 552 aaKnown RBP11.89□□□□□ -0.51
SPAST-201ENST00000315285 CXorf1O96002 111 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 HOXA6P31267 233 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 LAMTOR1Q6IAA8 161 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 OR52L2PQ8NGH6 319 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 ABHD14AQ9BUJ0 271 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 SPAARA0A1B0GVQ0 90 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 ADAM11O75078 769 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 HBZP02008 142 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 CD3EP07766 207 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 PGA5P0DJD9 388 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 CEACAM3P40198 252 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 UNC119Q13432 240 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 C10orf128Q5T292 105 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 FAM214BQ7L5A3 538 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 TGIF2LXQ8IUE1 241 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 ZNF253O75346 499 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 HTR1DP28221 377 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 COX19Q49B96 90 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 WNT2BQ93097 391 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 AURKAIP1Q9NWT8 199 aaPredicted RBP11.89□□□□□ -0.51
SPAST-201ENST00000315285 THYN1Q9P016 225 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 PGLYRP1O75594 196 aaPredicted RBP11.89□□□□□ -0.51
SPAST-201ENST00000315285 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 ANK1P16157 1881 aa11.89□□□□□ -0.51
SPAST-201ENST00000315285 G0S2P27469 103 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 CD1BP29016 333 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 NSUN5P2Q63ZY6 315 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
SPAST-201ENST00000315285 GPHA2Q96T91 129 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 WNT5BQ9H1J7 359 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 LYRM2Q9NU23 88 aaPredicted RBP11.88□□□□□ -0.51
SPAST-201ENST00000315285 HPRT1P00492 218 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 NFAM1Q8NET5 270 aaPredicted RBP11.88□□□□□ -0.51
SPAST-201ENST00000315285 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 PRDM14Q9GZV8 571 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 MTCL1Q9Y4B5 1905 aaKnown RBP11.88□□□□□ -0.51
SPAST-201ENST00000315285 A0A1W2PPE3 182 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 CLDN14O95500 239 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 S100A4P26447 101 aaKnown RBP11.88□□□□□ -0.51
SPAST-201ENST00000315285 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 IGKV1D-43A0A0B4J1Z2 117 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 HELTA6NFD8 242 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 J3QR06 171 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 MGST3O14880 152 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 RAMP1O60894 148 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 POC1AQ8NBT0 407 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 NPTNQ9Y639 398 aa11.88□□□□□ -0.51
SPAST-201ENST00000315285 A0A087X0M5 115 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 A0A1B0GX30 115 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 RAB1CQ92928 201 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 HES7Q9BYE0 225 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 PKIBQ9C010 78 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 CACNA1EQ15878 2313 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 CEP250Q9BV73 2442 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
SPAST-201ENST00000315285 HSPB1P04792 205 aaKnown RBP11.87□□□□□ -0.51
SPAST-201ENST00000315285 NAT1P18440 290 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 NHLRC2Q8NBF2 726 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 RTTNQ86VV8 2226 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 USF1P22415 310 aaPredicted RBP11.87□□□□□ -0.51
SPAST-201ENST00000315285 SELENOHQ8IZQ5 122 aaKnown RBP11.87□□□□□ -0.51
SPAST-201ENST00000315285 GPR146Q96CH1 333 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 LOC390937A0A1W2PQ73 354 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 GAMTQ14353 236 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 TMEM54Q969K7 222 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
SPAST-201ENST00000315285 FAM157AC9JC47 383 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
SPAST-201ENST00000315285 ZNF826PQ6ZT77 177 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms