RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 IL17BQ9UHF5 180 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 COL6A6A6NMZ7 2263 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 SLC22A20A6NK97 555 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 CDIPTO14735 213 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 TM4SF5O14894 197 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 IGHEP01854 428 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 ASPHD1Q5U4P2 390 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 LYPD6Q86Y78 171 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 NINJ1Q92982 152 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 GPR87Q9BY21 358 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 NOTCH3Q9UM47 2321 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 LOC102725191A0A1B0GVB3 256 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 DDTP30046 118 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 WNT5AP41221 380 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
PTPN9-201ENST00000306726 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
PTPN9-201ENST00000306726 OR5D13Q8NGL4 314 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 OR4C12Q96R67 309 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 SERTAD4Q9NUC0 356 aa12.47□□□□□ -0.41
PTPN9-201ENST00000306726 IGHMP01871 453 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 GALR1P47211 349 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 SRSF4Q08170 494 aaKnown RBP12.46□□□□□ -0.41
PTPN9-201ENST00000306726 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.41
PTPN9-201ENST00000306726 OR2H1Q9GZK4 316 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 FOXD3Q9UJU5 478 aaPredicted RBP12.46□□□□□ -0.41
PTPN9-201ENST00000306726 CHCHD2Q9Y6H1 151 aaPredicted RBP12.46□□□□□ -0.41
PTPN9-201ENST00000306726 CFAP47Q6ZTR5 3102 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 FABP6P51161 128 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 TMEM41BQ5BJD5 291 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 ZNF441Q8N8Z8 693 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 WDR54Q9H977 334 aa12.46□□□□□ -0.41
PTPN9-201ENST00000306726 SEC14L6B5MCN3 397 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 K7N7A8 449 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 AQP7O14520 342 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 HOXA5P20719 270 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 VDAC1P21796 283 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 TCL1AP56279 114 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 RAB35Q15286 201 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 GCSAMLQ5JQS6 135 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 VKORC1L1Q8N0U8 176 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 FAM89BQ8N5H3 189 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 MISP3Q96FF7 219 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 ADAMTS20P59510 1910 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 MED12LQ86YW9 2145 aa12.46□□□□□ -0.42
PTPN9-201ENST00000306726 A0A1W2PPV4 95 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 LRRC3CA6NJW4 275 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 FGF7P21781 194 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 C20orf204Q6ZNR8 217 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 Q6ZRM9 215 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 MOB3AQ96BX8 217 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 GINS3Q9BRX5 216 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 TRAV38-1A0A0B4J264 116 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 HBE1P02100 147 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
PTPN9-201ENST00000306726 OR8G1Q15617 311 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 SSMEM1Q8WWF3 244 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 ZDHHC16Q969W1 377 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 SYNGR2O43760 224 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 SYNGR4O95473 234 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 SLC38A11Q08AI6 406 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 MALSU1Q96EH3 234 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 WNT5BQ9H1J7 359 aa12.45□□□□□ -0.42
PTPN9-201ENST00000306726 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
PTPN9-201ENST00000306726 IGLV3-12A0A075B6K2 115 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 LIFP15018 202 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PTGDSP41222 190 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 COL10A1Q03692 680 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 DHRS13Q6UX07 377 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 TCF23Q7RTU1 214 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 ABHD14BQ96IU4 210 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 ARV1Q9H2C2 271 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 KIAA1456Q9P272 454 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 DUSP13Q9UII6 198 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PGLYRP1O75594 196 aaPredicted RBP12.44□□□□□ -0.42
PTPN9-201ENST00000306726 OR3A1P47881 315 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 MRGPRDQ8TDS7 321 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 IMMP2LQ96T52 175 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 ATP5SQ99766 215 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PRSS50Q9UI38 385 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PAM16Q9Y3D7 125 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 IFITM10A6NMD0 228 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 IFNA1P01562 189 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 IGHV2-70P01814 119 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 PSMB3P49720 205 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 SUMO3P55854 103 aaPredicted RBP12.44□□□□□ -0.42
PTPN9-201ENST00000306726 DSCR4P56555 118 aaPredicted RBP12.44□□□□□ -0.42
PTPN9-201ENST00000306726 ARL16Q0P5N6 197 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 BSXQ3C1V8 233 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 DEFB108BQ8NET1 73 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 MTCH1Q9NZJ7 389 aa12.44□□□□□ -0.42
PTPN9-201ENST00000306726 SPSB3Q6PJ21 355 aa12.43□□□□□ -0.42
PTPN9-201ENST00000306726 ZIC4Q8N9L1 334 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms