RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 FAM201AQ5SY85 155 aa8.82□□□□□ -1
CLP1-201ENST00000302731 THOC7Q6I9Y2 204 aaKnown RBP8.82□□□□□ -1
CLP1-201ENST00000302731 ZNF808Q8N4W9 903 aaPredicted RBP8.82□□□□□ -1
CLP1-201ENST00000302731 TPRX1Q8N7U7 411 aa8.82□□□□□ -1
CLP1-201ENST00000302731 OR52M1Q8NGK5 317 aa8.82□□□□□ -1
CLP1-201ENST00000302731 UBALD1Q8TB05 177 aa8.82□□□□□ -1
CLP1-201ENST00000302731 GAFA1Q96PS6 74 aa8.82□□□□□ -1
CLP1-201ENST00000302731 TMEM204Q9BSN7 226 aa8.82□□□□□ -1
CLP1-201ENST00000302731 ZNF471Q9BX82 626 aaPredicted RBP8.82□□□□□ -1
CLP1-201ENST00000302731 PARP12Q9H0J9 701 aaKnown RBP8.82□□□□□ -1
CLP1-201ENST00000302731 LINC00574Q9H8X3 128 aa8.82□□□□□ -1
CLP1-201ENST00000302731 DYNLRB1Q9NP97 96 aa8.82□□□□□ -1
CLP1-201ENST00000302731 KCNS2Q9ULS6 477 aa8.82□□□□□ -1
CLP1-201ENST00000302731 A0A1B0GU03 582 aa8.81□□□□□ -1
CLP1-201ENST00000302731 MSGN1A6NI15 193 aa8.81□□□□□ -1
CLP1-201ENST00000302731 NKX6-3A6NJ46 265 aa8.81□□□□□ -1
CLP1-201ENST00000302731 F5H0A9 414 aaPredicted RBP8.81□□□□□ -1
CLP1-201ENST00000302731 TMEM178BH3BS89 294 aa8.81□□□□□ -1
CLP1-201ENST00000302731 SPDEFO95238 335 aa8.81□□□□□ -1
CLP1-201ENST00000302731 HKR1P10072 659 aa8.81□□□□□ -1
CLP1-201ENST00000302731 TPT1P13693 172 aaKnown RBP8.81□□□□□ -1
CLP1-201ENST00000302731 MMP9P14780 707 aa8.81□□□□□ -1
CLP1-201ENST00000302731 RPL12P30050 165 aaKnown RBP8.81□□□□□ -1
CLP1-201ENST00000302731 P2RY1P47900 373 aa8.81□□□□□ -1
CLP1-201ENST00000302731 EIF5AP63241 154 aaKnown RBP8.81□□□□□ -1
CLP1-201ENST00000302731 TFF3Q07654 80 aa8.81□□□□□ -1
CLP1-201ENST00000302731 CATR1Q13166 79 aa8.81□□□□□ -1
CLP1-201ENST00000302731 GNMTQ14749 295 aa8.81□□□□□ -1
CLP1-201ENST00000302731 SWI5Q1ZZU3 235 aa8.81□□□□□ -1
CLP1-201ENST00000302731 GPR157Q5UAW9 335 aa8.81□□□□□ -1
CLP1-201ENST00000302731 ZNF66Q6ZN08 573 aa8.81□□□□□ -1
CLP1-201ENST00000302731 OR51H1Q8NH63 302 aa8.81□□□□□ -1
CLP1-201ENST00000302731 CORO2AQ92828 525 aa8.81□□□□□ -1
CLP1-201ENST00000302731 AGMATQ9BSE5 352 aa8.81□□□□□ -1
CLP1-201ENST00000302731 OR2D2Q9H210 308 aa8.81□□□□□ -1
CLP1-201ENST00000302731 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
CLP1-201ENST00000302731 TMEM106BQ9NUM4 274 aa8.81□□□□□ -1
CLP1-201ENST00000302731 MED9Q9NWA0 146 aa8.81□□□□□ -1
CLP1-201ENST00000302731 CISD1Q9NZ45 108 aaKnown RBP8.81□□□□□ -1
CLP1-201ENST00000302731 GAB2Q9UQC2 676 aa8.81□□□□□ -1
CLP1-201ENST00000302731 LSM5Q9Y4Y9 91 aaKnown RBP8.81□□□□□ -1
CLP1-201ENST00000302731 DYSFO75923 2080 aa8.81□□□□□ -1
CLP1-201ENST00000302731 PPIAL4EA0A075B759 164 aa8.8□□□□□ -1
CLP1-201ENST00000302731 TRGV10A0A0A0MS01 117 aa8.8□□□□□ -1
CLP1-201ENST00000302731 MED19A0JLT2 244 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 PPIAL4DF5H284 164 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ADAM20O43506 726 aa8.8□□□□□ -1
CLP1-201ENST00000302731 PITX3O75364 302 aa8.8□□□□□ -1
CLP1-201ENST00000302731 FSTL3O95633 263 aa8.8□□□□□ -1
CLP1-201ENST00000302731 SCGB1D2O95969 90 aa8.8□□□□□ -1
CLP1-201ENST00000302731 PPIAL4FP0DN26 164 aa8.8□□□□□ -1
CLP1-201ENST00000302731 AGAP20933 346 aa8.8□□□□□ -1
CLP1-201ENST00000302731 LOXP28300 417 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 GRNP28799 593 aaKnown RBP8.8□□□□□ -1
CLP1-201ENST00000302731 PPP1CCP36873 323 aaKnown RBP8.8□□□□□ -1
CLP1-201ENST00000302731 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 EDDM3BP56851 147 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ID3Q02535 119 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ZNF672Q499Z4 452 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 MORN2Q502X0 79 aa8.8□□□□□ -1
CLP1-201ENST00000302731 KIAA2026Q5HYC2 2103 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ALKAL2Q6UX46 152 aa8.8□□□□□ -1
CLP1-201ENST00000302731 GPHA2Q96T91 129 aa8.8□□□□□ -1
CLP1-201ENST00000302731 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
CLP1-201ENST00000302731 DCTN5Q9BTE1 182 aa8.8□□□□□ -1
CLP1-201ENST00000302731 C11orf1Q9H5F2 150 aa8.8□□□□□ -1
CLP1-201ENST00000302731 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
CLP1-201ENST00000302731 CALYQ9NYX4 217 aa8.8□□□□□ -1
CLP1-201ENST00000302731 PPIAL4AQ9Y536 164 aa8.8□□□□□ -1
CLP1-201ENST00000302731 SPTA1P02549 2419 aa8.8□□□□□ -1
CLP1-201ENST00000302731 KBTBD11-OT1A0A1B0GTJ5 212 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ZNF729A6NN14 1252 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 DEFB108AA8MXU0 73 aa8.8□□□□□ -1
CLP1-201ENST00000302731 TNFRSF13BO14836 293 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 NDUFA2O43678 99 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ATG12O94817 140 aa8.8□□□□□ -1
CLP1-201ENST00000302731 GYPAP02724 150 aa8.8□□□□□ -1
CLP1-201ENST00000302731 GAPDHP04406 335 aaKnown RBP8.8□□□□□ -1
CLP1-201ENST00000302731 NMBP08949 121 aa8.8□□□□□ -1
CLP1-201ENST00000302731 PVALBP20472 110 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 LOXL3P58215 753 aa8.8□□□□□ -1
CLP1-201ENST00000302731 MEF2CQ06413 473 aaPredicted RBP8.8□□□□□ -1
CLP1-201ENST00000302731 CDSNQ15517 529 aa8.8□□□□□ -1
CLP1-201ENST00000302731 C17orf58Q2M2W7 97 aa8.8□□□□□ -1
CLP1-201ENST00000302731 ZNF585BQ52M93 769 aa8.8□□□□□ -1
CLP1-201ENST00000302731 C4orf17Q53FE4 359 aa8.8□□□□□ -1
CLP1-201ENST00000302731 FAM219AQ8IW50 185 aa8.8□□□□□ -1
CLP1-201ENST00000302731 FOXRED2Q8IWF2 684 aa8.8□□□□□ -1
CLP1-201ENST00000302731 BAP18Q8IXM2 172 aa8.8□□□□□ -1
CLP1-201ENST00000302731 DEFB108BQ8NET1 73 aa8.8□□□□□ -1
CLP1-201ENST00000302731 DMBX1Q8NFW5 382 aa8.8□□□□□ -1
CLP1-201ENST00000302731 RFESDQ8TAC1 157 aa8.8□□□□□ -1
CLP1-201ENST00000302731 NEUROG1Q92886 237 aa8.8□□□□□ -1
CLP1-201ENST00000302731 FAM122AQ96E09 287 aa8.8□□□□□ -1
CLP1-201ENST00000302731 CCL13Q99616 98 aa8.8□□□□□ -1
CLP1-201ENST00000302731 GNG12Q9UBI6 72 aa8.8□□□□□ -1
CLP1-201ENST00000302731 KAAG1Q9UBP8 84 aa8.8□□□□□ -1
CLP1-201ENST00000302731 CLN8Q9UBY8 286 aa8.8□□□□□ -1
CLP1-201ENST00000302731 LAMP3Q9UQV4 416 aa8.8□□□□□ -1
CLP1-201ENST00000302731 RCL1Q9Y2P8 373 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms