RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PCOLCE2Q9UKZ9 415 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 YLPM1P49750 1951 aaKnown RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PTP4A3O75365 173 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CFDP00746 253 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CSN3P07498 182 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 STAG3L3P0CL85 134 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PSG2P11465 335 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CALHM1Q8IU99 346 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM183AQ8IXX5 376 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 HARBI1Q96MB7 349 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 FAM117AQ9C073 453 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 OR2W5A6NFC9 320 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 K7N7A8 449 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 KIR2DL1P43626 348 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 KIR2DL2P43627 348 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 ROM1Q03395 351 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 TWIST1Q15672 202 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 NHLRC3Q5JS37 347 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CST9Q5W186 159 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 LEMD1Q68G75 181 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF660Q6AZW8 331 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 MS4A7Q9GZW8 240 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 TEX30Q5JUR7 227 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 ABHD14AQ9BUJ0 271 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 NPVFQ9HCQ7 196 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 NPDC1Q9NQX5 325 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PPIHO43447 177 aaKnown RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CD8AP01732 235 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CT62P0C5K7 136 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 DANCRP0C864 163 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 GLIPR1P48060 266 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 TCL1AP56279 114 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PTPMT1Q8WUK0 201 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 A0A1W2PPC1 479 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 OR4C46A6NHA9 309 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 VENTXO95231 258 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 LIMS1P48059 325 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 GNRHR2Q96P88 292 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 MFRPQ9BY79 579 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 TRAV9-1A0A075B6T8 112 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 A0A1B0GTH9 108 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 SHISA8B8ZZ34 492 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 F2RL2O00254 374 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CDX4O14627 284 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 HYPMO75409 117 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 VSIG10L2P0DP72 767 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 PSG6Q00889 435 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 OTPQ5XKR4 325 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF385CQ66K41 422 aaPredicted RBP6.67□□□□□ -1.34
SF3B3-201ENST00000302516 SLC25A34Q6PIV7 304 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 LINC00518Q8N0U6 118 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 GCSAMQ8N6F7 178 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 SFXN3Q9BWM7 321 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 CCL28Q9NRJ3 127 aa6.67□□□□□ -1.34
SF3B3-201ENST00000302516 MED19A0JLT2 244 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 PSG9Q00887 426 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 CEACAM21Q3KPI0 293 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 IBA57Q5T440 356 aaKnown RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM136Q6ZRR5 245 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 FBXO17Q96EF6 278 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 HSPB9Q9BQS6 159 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 ASAH2BP0C7U1 165 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 LIFP15018 202 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR4D11Q8NGI4 311 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM208Q9BTX3 173 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 GPR61Q9BZJ8 451 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 RNF7Q9UBF6 113 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 KCNMB2Q9Y691 235 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 IGHMP01871 453 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR4A8P0C604 315 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 MYOGP15173 224 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 PIGYQ3MUY2 71 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 MRPL32Q9BYC8 188 aaKnown RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 RCC1P18754 421 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 HIKESHIQ53FT3 197 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 DNLZQ5SXM8 178 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF880Q6PDB4 577 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 TGIF2LYQ8IUE0 185 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 A0A0B4J293 547 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 MFAP2P55001 183 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 RGP1Q92546 391 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 GUCD1Q96NT3 240 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 SCNM1Q9BWG6 230 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 KIAA2026Q5HYC2 2103 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 IGHV3-43A0A0B4J1X8 118 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 DLL1O00548 723 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 IGHV3-43DP0DP04 118 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 HOXA4Q00056 320 aaPredicted RBP6.66□□□□□ -1.34
SF3B3-201ENST00000302516 FAM27BQ5VT28 67 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 OR2I1PQ8NGU4 316 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 RASL10BQ96S79 203 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 ALPK2Q86TB3 2170 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 A0A1B0GV72 72 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 TMPRSS2O15393 492 aa6.66□□□□□ -1.34
SF3B3-201ENST00000302516 ZNF735P0CB33 412 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms