RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ARHGAP21Q5T5U3 1957 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 F8VVB4 439 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 F8VWA3 439 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 CRYAAP02489 173 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 TAS2R30P59541 319 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 TMEM41BQ5BJD5 291 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 OR13D1Q8NGV5 346 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 OR4A16Q8NH70 328 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 NTNG2Q96CW9 530 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 WFIKKN1Q96NZ8 548 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 TMEM222Q9H0R3 208 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 SIRT7Q9NRC8 400 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 CLN8Q9UBY8 286 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
SDC2-201ENST00000302190 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
SDC2-201ENST00000302190 DANCRP0C864 163 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 MOB3AQ96BX8 217 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 SPENQ96T58 3664 aaKnown RBP12.06□□□□□ -0.48
SDC2-201ENST00000302190 PRSS50Q9UI38 385 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 RPH3ALQ9UNE2 315 aa12.06□□□□□ -0.48
SDC2-201ENST00000302190 IGKV1D-13A0A0B4J2D9 117 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 LNP1A1A4G5 178 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 RPL36A-HNRNPH2H7BZ11 118 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 FGF16O43320 207 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 ACTL6BO94805 426 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 IGKV1-13P0DP09 117 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 EGR1P18146 543 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 ARR3P36575 388 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 AESQ08117 197 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 ZNF385CQ66K41 422 aaPredicted RBP12.05□□□□□ -0.48
SDC2-201ENST00000302190 TMEM211Q6ICI0 200 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 C2orf88Q9BSF0 95 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 ZDHHC8Q9ULC8 765 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 NOTCH3Q9UM47 2321 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 RHBDL1O75783 438 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 CDS2O95674 445 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 TFF1P04155 84 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 FAM157CP0CG43 387 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 HLA-GP17693 338 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 HOXA5P20719 270 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 GNG10P50151 68 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 CPEB3Q8NE35 698 aaKnown RBP12.05□□□□□ -0.48
SDC2-201ENST00000302190 GALMQ96C23 342 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 NEU1Q99519 415 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 ZNF737O75373 536 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 IGHEP01854 428 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 UMODP07911 640 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 MEOX1P50221 254 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 COMMD1Q8N668 190 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 SMIM8Q96KF7 97 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 SAMD10Q9BYL1 202 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
SDC2-201ENST00000302190 LIN7CQ9NUP9 197 aaKnown RBP12.05□□□□□ -0.48
SDC2-201ENST00000302190 POLDIP2Q9Y2S7 368 aa12.05□□□□□ -0.48
SDC2-201ENST00000302190 LRP5LA4QPB2 252 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 CLDN34H7C241 214 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 SLC25A6P12236 298 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 SF3B5Q9BWJ5 86 aaKnown RBP12.04□□□□□ -0.48
SDC2-201ENST00000302190 OPN3Q9H1Y3 402 aaPredicted RBP12.04□□□□□ -0.48
SDC2-201ENST00000302190 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
SDC2-201ENST00000302190 TUBG2Q9NRH3 451 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 NPIPB13A6NJU9 1138 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 NPIPB4C9JG80 1138 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 FCGR3BO75015 233 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 MMP7P09237 267 aaPredicted RBP12.04□□□□□ -0.48
SDC2-201ENST00000302190 CSRP1P21291 193 aaKnown RBP12.04□□□□□ -0.48
SDC2-201ENST00000302190 F2RP25116 425 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 SELENOVP59797 346 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 FOXO1Q12778 655 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 PRDM13Q9H4Q3 707 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 ZNF320A2RRD8 509 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 OR5H1A6NKK0 313 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 HGFACQ04756 655 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 M1APQ8TC57 530 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 ATP5SQ99766 215 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 GOLT1BQ9Y3E0 138 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
SDC2-201ENST00000302190 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 PTGDSP41222 190 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 ABHD14BQ96IU4 210 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 LIME1Q9H400 295 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 PMELP40967 661 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 ZIC4Q8N9L1 334 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 C1orf147Q96MC9 270 aaPredicted RBP12.03□□□□□ -0.48
SDC2-201ENST00000302190 TRGV5A0A0B4J1U4 118 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 SYNGR3O43761 229 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 DEFA4P12838 97 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 NUTF2P61970 127 aaKnown RBP12.03□□□□□ -0.48
SDC2-201ENST00000302190 H3F3AP84243 136 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 MDP1Q86V88 176 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 LHFPL1Q86WI0 220 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 RPRMQ9NS64 109 aa12.03□□□□□ -0.48
SDC2-201ENST00000302190 ZZEF1O43149 2961 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms