RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MAS1LP35410 378 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 CEACAM3P40198 252 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 TGIF1Q15583 401 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 LHFPL4Q7Z7J7 247 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 C14orf144Q96I85 54 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 HARBI1Q96MB7 349 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 ST6GALNAC2Q9UJ37 374 aa12.97□□□□□ -0.33
SCN3B-201ENST00000299333 CCL7P80098 99 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 SIRT4Q9Y6E7 314 aaPredicted RBP12.96□□□□□ -0.33
SCN3B-201ENST00000299333 LRP5O75197 1615 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 SRSF4Q08170 494 aaKnown RBP12.96□□□□□ -0.33
SCN3B-201ENST00000299333 PQLC2Q6ZP29 291 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 OR5R1Q8NH85 324 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 CHODLQ9H9P2 273 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 RND3P61587 244 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
SCN3B-201ENST00000299333 HIGD1AQ9Y241 93 aa12.96□□□□□ -0.33
SCN3B-201ENST00000299333 RPL36A-HNRNPH2H7BZ11 118 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 J3QR06 171 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 C8orf82Q6P1X6 216 aaPredicted RBP12.96□□□□□ -0.34
SCN3B-201ENST00000299333 C10orf111Q8N326 155 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 NEU1Q99519 415 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 PMCHL2Q9BQD1 86 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 RSPO3Q9BXY4 272 aaPredicted RBP12.96□□□□□ -0.34
SCN3B-201ENST00000299333 ZDHHC8Q9ULC8 765 aa12.96□□□□□ -0.34
SCN3B-201ENST00000299333 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.95□□□□□ -0.34
SCN3B-201ENST00000299333 SYNGR1O43759 233 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 VEGFBP49765 207 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 OR51B2Q9Y5P1 312 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 FER1L6Q2WGJ9 1857 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 LIPFP07098 398 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 PPP1CCP36873 323 aaKnown RBP12.95□□□□□ -0.34
SCN3B-201ENST00000299333 GFRA1P56159 465 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 KRTCAP3Q53RY4 240 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 RBFOX2O43251 390 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCN3B-201ENST00000299333 TGFAP01135 160 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 LRRC75BQ2VPJ9 315 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 C2orf83Q53S99 150 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 WFDC3Q8IUB2 231 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
SCN3B-201ENST00000299333 A1L4Q6 167 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 GCSAMLQ5JQS6 135 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 LGALS3P17931 250 aaKnown RBP12.95□□□□□ -0.34
SCN3B-201ENST00000299333 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 WDR34Q96EX3 536 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 AUP1Q9Y679 476 aa12.95□□□□□ -0.34
SCN3B-201ENST00000299333 IGLV3-16A0A075B6K0 115 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 ATG4DQ86TL0 474 aaPredicted RBP12.94□□□□□ -0.34
SCN3B-201ENST00000299333 RNF122Q9H9V4 155 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 NPVFQ9HCQ7 196 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 LOC390937A0A1W2PQ73 354 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 LILRA5A6NI73 299 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 MEF2CQ06413 473 aaPredicted RBP12.94□□□□□ -0.34
SCN3B-201ENST00000299333 SH3BGRL3Q9H299 93 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 TNFSF10P50591 281 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
SCN3B-201ENST00000299333 TMEM196Q5HYL7 178 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 WNT10AQ9GZT5 417 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 RAXQ9Y2V3 346 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
SCN3B-201ENST00000299333 KLF4O43474 513 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 HLA-DQB1P01920 261 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 RABAC1Q9UI14 185 aa12.94□□□□□ -0.34
SCN3B-201ENST00000299333 GLIPR1P48060 266 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 MRPL52Q86TS9 123 aaKnown RBP12.93□□□□□ -0.34
SCN3B-201ENST00000299333 TMEM70Q9BUB7 260 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 SMOC1Q9H4F8 434 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 ZFP64Q9NPA5 681 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 A0A1W2PPE3 182 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 A6NNC1 897 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 H3BUT2 72 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 FTH1P19P0C7X4 201 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 SNAI3Q3KNW1 292 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 OR1L8Q8NGR8 309 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 P2RX4Q99571 388 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 GZMHP20718 246 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 ZBTB34Q8NCN2 500 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 TMUB1Q9BVT8 246 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 FNDC4Q9H6D8 234 aaPredicted RBP12.93□□□□□ -0.34
SCN3B-201ENST00000299333 GLRX2Q9NS18 164 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 CISD1Q9NZ45 108 aaKnown RBP12.93□□□□□ -0.34
SCN3B-201ENST00000299333 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 NPIPB8E9PQR5 432 aa12.93□□□□□ -0.34
SCN3B-201ENST00000299333 NPIPB7O75200 414 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms