RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 RAB39BQ96DA2 213 aa17.06■□□□□ 0.32
PACSIN3-201ENST00000298838 PPIAL4CA0A0B4J2A2 164 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 VWC2LB2RUY7 222 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 GPR31O00270 319 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 PPIAL4GP0DN37 164 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 DHODHQ02127 395 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 PHLDA2Q53GA4 152 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 ZNF818PQ6ZRF7 136 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 LYG2Q86SG7 212 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 LDLRAD3Q86YD5 345 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 CMTM1Q8IZ96 169 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 CCDC71LQ8N9Z2 235 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 OR2AK2Q8NG84 335 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 ZNF431Q8TF32 576 aaPredicted RBP17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 CCL28Q9NRJ3 127 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 KCNS2Q9ULS6 477 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 HSD17B6O14756 317 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 SSNA1O43805 119 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 DLX6P56179 175 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 SGPP2Q8IWX5 399 aa17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 RTN4IP1Q8WWV3 396 aaPredicted RBP17.05■□□□□ 0.32
PACSIN3-201ENST00000298838 LOC105371242A0A075B767 164 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 C9orf170A2RU37 121 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 C22orf46C9J442 243 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 MMP23AO75900 390 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 LIPFP07098 398 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 S100GP29377 79 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 LMO4P61968 165 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 DEFB113Q30KQ7 82 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 C11orf88Q6PI97 169 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 LY6G5BQ8NDX9 201 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 MED28Q9H204 178 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 OR2D2Q9H210 308 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 APCP25054 2843 aa17.04■□□□□ 0.32
PACSIN3-201ENST00000298838 CSMD2Q7Z408 3487 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 IGHV4-30-2A0A087WSY4 118 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 TEX13DA0A0J9YY54 714 aaPredicted RBP17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 PFDN1O60925 122 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 RRAS2P62070 204 aaPredicted RBP17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 LRRC75A-AS1Q8N1F1 130 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 BVESQ8NE79 360 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 AKR1E2Q96JD6 320 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 PSG11Q9UQ72 335 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 NAV2Q8IVL1 2488 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 CRYM-AS1A6NIL9 109 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 C17orf98A8MV24 154 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 TRAPPC2P0DI81 140 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 TRAPPC2BP0DI82 140 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 RAB7AP51149 207 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 SUPT4H1P63272 117 aaKnown RBP17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 LY6G6FQ5SQ64 297 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 ZNF645Q8N7E2 425 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 CHAC2Q8WUX2 184 aa17.03■□□□□ 0.32
PACSIN3-201ENST00000298838 KIAA1324LA8MWY0 1029 aaPredicted RBP17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 A8MXK9 166 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 ITGB1BP1O14713 200 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 ST8SIA5O15466 376 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 SLC22A5O76082 557 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 IGHV3-7P01780 117 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 RBP4P02753 201 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 ERVFRD-1P60508 538 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 RND3P61587 244 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 CLEC12BQ2HXU8 276 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 LEAP2Q969E1 77 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 AGMATQ9BSE5 352 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 ABHD14AQ9BUJ0 271 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 RNF150Q9ULK6 438 aa17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 ASH1LQ9NR48 2969 aaKnown RBP17.02■□□□□ 0.31
PACSIN3-201ENST00000298838 IGHV4-61A0A0C4DH41 118 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 hCG_1809904A0A1W2PP81 198 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 A0A1W2PPE2 198 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 A0A1W2PR64 198 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 A0A1W2PRV1 198 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 HMX3A6NHT5 357 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 SFT2D2O95562 160 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 DUS4LO95620 317 aaKnown RBP17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 IGLV2-14P01704 120 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 IGHV1-8P0DP01 117 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 CASTOR1Q8WTX7 329 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 NAA60Q9H7X0 242 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 KCNIP3Q9Y2W7 256 aa17.01■□□□□ 0.31
PACSIN3-201ENST00000298838 MPPED1O15442 326 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ZNF134P52741 427 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 MSMO1Q15800 293 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 Q3ZCU0 254 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 UTF1Q5T230 341 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 C11orf42Q8N5U0 333 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 DRAM1Q8N682 238 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ZBTB34Q8NCN2 500 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 MITD1Q8WV92 249 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 MBD6Q96DN6 1003 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 PHB2Q99623 299 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ONECUT1Q9UBC0 465 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ENSAO43768 121 aaKnown RBP17■□□□□ 0.31
PACSIN3-201ENST00000298838 IFNA2P01563 188 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ANXA3P12429 323 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 SLC25A16P16260 332 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 ZFP36P26651 326 aaKnown RBP17■□□□□ 0.31
PACSIN3-201ENST00000298838 GNG10P50151 68 aa17■□□□□ 0.31
PACSIN3-201ENST00000298838 SLC9A3R2Q15599 337 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms