RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ACSM6Q6P461 480 aa8.76□□□□□ -1.01
LMX1A-201ENST00000294816 VN1R17PQ8TDU5 208 aa8.76□□□□□ -1.01
LMX1A-201ENST00000294816 NEIL1Q96FI4 390 aaPredicted RBP8.76□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF488Q96MN9 340 aa8.76□□□□□ -1.01
LMX1A-201ENST00000294816 TRANK1O15050 2925 aa8.76□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM210A6NLX4 147 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 LILRA1O75019 489 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 RBMXL2O75526 392 aaKnown RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 TUSC2O75896 110 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 CELA2AP08217 269 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 EDN3P14138 238 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 PDLIM4P50479 330 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF501Q96CX3 271 aaPredicted RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 MTIF3Q9H2K0 278 aaKnown RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 ZDHHC11Q9H8X9 412 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 M0QZK8 103 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 GGCTO75223 188 aaKnown RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 TIAF1O95411 115 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 CCL2P13500 99 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 PSG4Q00888 419 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 ASCL4Q6XD76 172 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 OR56B2PQ8NGI1 322 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 FGFBP3Q8TAT2 258 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 ZCCHC14Q8WYQ9 949 aaKnown RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 CLDN23Q96B33 292 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 SAMD10Q9BYL1 202 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 BRWD1Q9NSI6 2320 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 KIR2DL5BA0A0G2JN68 375 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 KIR2DL5BA0A0G2JPC4 375 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 hCG_38984A0A1B0GV85 526 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 C11orf94C9JXX5 98 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 TRAPPC2LH3BP13 241 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 TP53I11O14683 189 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 KIR2DL5AQ8N109 375 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF709Q8N972 641 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 PSMF1Q92530 271 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 IMMP2LQ96T52 175 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 AGMATQ9BSE5 352 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
LMX1A-201ENST00000294816 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 LPAR2Q9HBW0 351 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 OR1A1Q9P1Q5 309 aa8.75□□□□□ -1.01
LMX1A-201ENST00000294816 TRIOO75962 3097 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM250H0YL14 139 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 SRP14P37108 136 aaKnown RBP8.74□□□□□ -1.01
LMX1A-201ENST00000294816 HNRNPKP61978 463 aaKnown RBP eCLIP8.74□□□□□ -1.01
LMX1A-201ENST00000294816 CEACAM16Q2WEN9 425 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 ZNF573Q86YE8 665 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 OR6C1Q96RD1 312 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 HSPB9Q9BQS6 159 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM204Q9BSN7 226 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 A0A0J9YW62 118 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 LMO7DNF2Z398 122 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 SIAH2O43255 324 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 C1QTNF9P0C862 333 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 RHBDD2Q6NTF9 364 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 AAED1Q7RTV5 226 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 MKXQ8IYA7 352 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 SGMS2Q8NHU3 365 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 TUBG2Q9NRH3 451 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 IL36GQ9NZH8 169 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 OR2W1Q9Y3N9 320 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 PPIAL4AQ9Y536 164 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 EML6Q6ZMW3 1958 aa8.74□□□□□ -1.01
LMX1A-201ENST00000294816 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 ADMP35318 185 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 CLDN15P56746 228 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 C11orf42Q8N5U0 333 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 ZIC4Q8N9L1 334 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 OR2J1Q9GZK6 312 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 OR51B6Q9H340 312 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 ATP23Q9Y6H3 246 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 NDUFB4O95168 129 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 VAMP5O95183 116 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 IGKV1-39P01597 117 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 IGKV1D-39P04432 117 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 PRDX4Q13162 271 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM42Q69YG0 159 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TMPRSS7Q7RTY8 843 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 BAGE3Q86Y29 109 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 BAGE2Q86Y30 109 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TSTD1Q8NFU3 115 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 HLA-CQ95604 372 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 DERL1Q9BUN8 251 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 SRXN1Q9BYN0 137 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 HIPK2Q9H2X6 1198 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 TMEM38BQ9NVV0 291 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 CLN8Q9UBY8 286 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 CEP290O15078 2479 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 ATG2AQ2TAZ0 1938 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 LOC102725191A0A1B0GVB3 256 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 MDFIC2A0A1B0GVS7 189 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 KIAA1324LA8MWY0 1029 aaPredicted RBP8.73□□□□□ -1.01
LMX1A-201ENST00000294816 SCRG1O75711 98 aa8.73□□□□□ -1.01
LMX1A-201ENST00000294816 NAPSAO96009 420 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms