RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NMSQ5H8A3 153 aa7.65□□□□□ -1.19
PDPN-201ENST00000294489 ZBTB34Q8NCN2 500 aa7.65□□□□□ -1.19
PDPN-201ENST00000294489 TOLLIPQ9H0E2 274 aa7.65□□□□□ -1.19
PDPN-201ENST00000294489 IGLV2-14P01704 120 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 TFF1P04155 84 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 LOXP28300 417 aaPredicted RBP7.64□□□□□ -1.19
PDPN-201ENST00000294489 EIF4E3Q8N5X7 224 aaKnown RBP7.64□□□□□ -1.19
PDPN-201ENST00000294489 ZNF645Q8N7E2 425 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 SVIPQ8NHG7 77 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 ARL11Q969Q4 196 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 SNX22Q96L94 193 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 TAS2R3Q9NYW6 316 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 ZZEF1O43149 2961 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 PIEZO2Q9H5I5 2752 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 IGKV1D-17A0A075B6S4 117 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 BORCS7-ASMTA0A0B4J1R7 106 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 KRBOX1C9JBD0 128 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 WRBO00258 174 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 ZNF737O75373 536 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 FGF2P09038 288 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 VAMP2P63027 116 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 EDDM3AQ14507 147 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 DRAM1Q8N682 238 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 TPRX1Q8N7U7 411 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 SMIM3Q9BZL3 60 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 ITPR1Q14643 2758 aa7.64□□□□□ -1.19
PDPN-201ENST00000294489 A0A1B0GU03 582 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 A8MXK9 166 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 TEX46H3BTG2 121 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 MGST3O14880 152 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 SHOXO15266 292 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 FGF16O43320 207 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 SLC25A6P12236 298 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 GZMHP20718 246 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 POLR2GP62487 172 aaKnown RBP eCLIP7.63□□□□□ -1.19
PDPN-201ENST00000294489 CTAG1AP78358 180 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 CDSNQ15517 529 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 EFNB3Q15768 340 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 CR1LQ2VPA4 569 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 OR2C3Q8N628 320 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 DMBX1Q8NFW5 382 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 OR52L2PQ8NGH6 319 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 OR13A1Q8NGR1 328 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 PARP12Q9H0J9 701 aaKnown RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 NCOR1P1Q9H4R4 102 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ESRP2Q9H6T0 727 aaKnown RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 BARX1Q9HBU1 254 aaPredicted RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 RNF7Q9UBF6 113 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ARID1AO14497 2285 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 VSTM5A8MXK1 200 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 OR4A8P0C604 315 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ZP3P21754 424 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 CAV2P51636 162 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 AKR1C2P52895 323 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ID3Q02535 119 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 UBAC2Q8NBM4 344 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 LSM10Q969L4 123 aaKnown RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 TMEM204Q9BSN7 226 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 SLC25A31Q9H0C2 315 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 OR2D2Q9H210 308 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 GCM1Q9NP62 436 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 TLN1Q9Y490 2541 aaKnown RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 RAI1Q7Z5J4 1906 aaPredicted RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 IGHV3OR15-7A0A075B7D8 119 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ODAMA1E959 279 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 ATXN7O15265 892 aaPredicted RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 SSSCA1O60232 199 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 IRF2P14316 349 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 MMP9P14780 707 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 SSTR5P35346 364 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 HTD2P86397 168 aa7.63□□□□□ -1.19
PDPN-201ENST00000294489 CXorf66Q5JRM2 361 aaPredicted RBP7.63□□□□□ -1.19
PDPN-201ENST00000294489 ZNF705EA8MWA4 302 aaPredicted RBP7.62□□□□□ -1.19
PDPN-201ENST00000294489 E7EQL1 145 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 EPHA1P21709 976 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 CATR1Q13166 79 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 MSMO1Q15800 293 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 MST1LQ2TV78 715 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 TEX36Q5VZQ5 186 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 MARC2Q969Z3 335 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 GPR146Q96CH1 333 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 COQ3Q9NZJ6 369 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 LPAR3Q9UBY5 353 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 RNF150Q9ULK6 438 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 C17orf100A8MU93 164 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 K7N7A8 449 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 SIAH2O43255 324 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 TNFRSF1AP19438 455 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 AGAP20933 346 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 PPP1CCP36873 323 aaKnown RBP7.62□□□□□ -1.19
PDPN-201ENST00000294489 EWSR1Q01844 656 aaKnown RBP eCLIP7.62□□□□□ -1.19
PDPN-201ENST00000294489 RFESDQ8TAC1 157 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 EDARADDQ8WWZ3 215 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 SAT2Q96F10 170 aaPredicted RBP7.62□□□□□ -1.19
PDPN-201ENST00000294489 MAGT1Q9H0U3 335 aa7.62□□□□□ -1.19
PDPN-201ENST00000294489 LYRM2Q9NU23 88 aaPredicted RBP7.62□□□□□ -1.19
PDPN-201ENST00000294489 CADP27708 2225 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 NUDT19A8MXV4 375 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FBXO24O75426 580 aa7.61□□□□□ -1.19
PDPN-201ENST00000294489 FAM157CP0CG43 387 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms